Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16839 | Canola | cytosol, nucleus, plastid | 94.97 | 89.35 |
| CDX87185 | Canola | cytosol, nucleus, plastid | 94.97 | 89.35 |
| Bra035959.1-P | Field mustard | cytosol, nucleus, plastid | 94.34 | 89.29 |
| AT5G08190.1 | Thale cress | cytosol, nucleus, plastid | 90.57 | 88.34 |
| KRH56716 | Soybean | cytosol, mitochondrion, nucleus | 82.39 | 83.44 |
| VIT_17s0000g04350.t01 | Wine grape | cytosol, mitochondrion, nucleus | 81.13 | 83.23 |
| KRH03842 | Soybean | cytosol, mitochondrion, nucleus | 83.65 | 83.12 |
| GSMUA_Achr1P20700_001 | Banana | cytosol | 27.67 | 83.02 |
| KRH54787 | Soybean | cytosol, mitochondrion, nucleus | 80.5 | 82.05 |
| PGSC0003DMT400010436 | Potato | cytosol, mitochondrion, nucleus | 79.87 | 80.38 |
| Solyc06g069310.2.1 | Tomato | cytosol, mitochondrion, nucleus | 64.15 | 77.86 |
| PGSC0003DMT400063256 | Potato | cytosol, nucleus, plastid | 77.36 | 77.36 |
| PGSC0003DMT400059368 | Potato | cytosol | 74.84 | 76.77 |
| KRH62965 | Soybean | cytosol, nucleus | 50.31 | 74.77 |
| Solyc03g114400.2.1 | Tomato | cytosol, nucleus, plastid | 60.38 | 72.73 |
| GSMUA_Achr1P20710_001 | Banana | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 51.57 | 69.49 |
| GSMUA_Achr9P00790_001 | Banana | cytosol, nucleus, peroxisome | 72.33 | 66.47 |
| TraesCS3A01G450700.1 | Wheat | cytosol, mitochondrion, nucleus | 71.7 | 39.18 |
| TraesCS3B01G487800.1 | Wheat | cytosol, mitochondrion, nucleus | 71.7 | 38.51 |
| Zm00001d050242_P002 | Maize | plastid | 71.7 | 38.38 |
| EES13767 | Sorghum | nucleus | 71.7 | 38.38 |
| TraesCS3D01G443500.1 | Wheat | cytosol, mitochondrion, nucleus | 71.7 | 38.26 |
| Zm00001d032328_P005 | Maize | extracellular, plastid | 71.7 | 37.87 |
| HORVU3Hr1G097680.4 | Barley | cytosol, mitochondrion, nucleus | 69.81 | 36.16 |
| AT2G38880.8 | Thale cress | nucleus | 24.53 | 23.78 |
| AT4G14540.1 | Thale cress | nucleus | 23.27 | 22.98 |
| AT2G37060.2 | Thale cress | nucleus | 24.53 | 22.54 |
| AT1G09030.1 | Thale cress | nucleus | 19.5 | 22.3 |
| AT3G53340.5 | Thale cress | nucleus | 23.9 | 21.59 |
| AT5G47640.1 | Thale cress | nucleus | 25.79 | 21.58 |
| AT2G47810.1 | Thale cress | nucleus | 21.38 | 21.25 |
| Os08t0383700-02 | Rice | cytosol, extracellular | 32.08 | 20.56 |
| AT2G13570.1 | Thale cress | nucleus | 22.64 | 16.74 |
| AT5G47670.3 | Thale cress | nucleus | 22.01 | 14.96 |
| AT1G21970.1 | Thale cress | nucleus | 20.75 | 13.87 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.3.5.7.1.2 | EntrezGene:830715 | EntrezGene:832373 | UniProt:A0A178UF16 | ProteinID:AED91268.1 |
| ProteinID:AED93118.1 | ProteinID:AED93120.1 | EMBL:AF428400 | EMBL:AK227164 | EMBL:AK317460 | ProteinID:ANM68726.1 |
| ArrayExpress:AT5G23090 | EnsemblPlantsGene:AT5G23090 | RefSeq:AT5G23090 | TAIR:AT5G23090 | RefSeq:AT5G23090-TAIR-G | EnsemblPlants:AT5G23090.1 |
| TAIR:AT5G23090.1 | EMBL:AY057709 | EMBL:AY087017 | EMBL:AY116960 | EMBL:AY125544 | Unigene:At.270 |
| UniProt:B9DHA9 | ProteinID:BAB09826.1 | InterPro:CBFA_NFYB_domain | EMBL:D38110 | GO:GO:0003674 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0046982 | InterPro:Histone-fold | InterPro:IPR009072 | Symbol:NF-YB13 | RefSeq:NP_001330452.1 |
| RefSeq:NP_568190.1 | RefSeq:NP_851060.1 | RefSeq:NP_851061.1 | ProteinID:OAO92209.1 | ProteinID:OAO93303.1 | UniProt:P49592 |
| PFAM:PF00808 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF8 | SUPFAM:SSF47113 |
| UniParc:UPI0000000E39 | SEG:seg | : | : | : | : |
Description
DR1AT5G23090 protein [Source:UniProtKB/TrEMBL;Acc:B9DHA9]
Coordinates
chr5:+:7749030..7750612
Molecular Weight (calculated)
17943.2 Da
IEP (calculated)
4.462
GRAVY (calculated)
-0.681
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPMDIVGKS KEDASLPKAT MTKIIKEMLP PDVRVARDAQ DLLIECCVEF INLVSSESND VCNKEDKRTI APEHVLKALQ VLGFGEYIEE VYAAYEQHKY
101: ETMQDTQRSV KWNPGAQMTE EEAAAEQQRM FAEARARMNG GVSVPQPEHP ETDQRSPQS
101: ETMQDTQRSV KWNPGAQMTE EEAAAEQQRM FAEARARMNG GVSVPQPEHP ETDQRSPQS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.