Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH56716 | Soybean | cytosol, mitochondrion, nucleus | 89.03 | 87.9 |
| KRH54787 | Soybean | cytosol, mitochondrion, nucleus | 88.39 | 87.82 |
| KRH03842 | Soybean | cytosol, mitochondrion, nucleus | 89.03 | 86.25 |
| PGSC0003DMT400010436 | Potato | cytosol, mitochondrion, nucleus | 87.1 | 85.44 |
| GSMUA_Achr1P20700_001 | Banana | cytosol | 29.03 | 84.91 |
| Solyc06g069310.2.1 | Tomato | cytosol, mitochondrion, nucleus | 70.32 | 83.21 |
| KRH62965 | Soybean | cytosol, nucleus | 56.77 | 82.24 |
| PGSC0003DMT400059368 | Potato | cytosol | 81.94 | 81.94 |
| PGSC0003DMT400063256 | Potato | cytosol, nucleus, plastid | 83.87 | 81.76 |
| AT5G23090.1 | Thale cress | cytosol, nucleus, plastid | 83.23 | 81.13 |
| Solyc03g114400.2.1 | Tomato | cytosol, nucleus, plastid | 66.45 | 78.03 |
| Bra005976.1-P | Field mustard | cytosol, nucleus, plastid | 76.77 | 77.78 |
| GSMUA_Achr1P20710_001 | Banana | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 58.71 | 77.12 |
| AT5G08190.1 | Thale cress | cytosol, nucleus, plastid | 80.65 | 76.69 |
| CDX69967 | Canola | cytosol, nucleus, plastid | 80.65 | 75.76 |
| Bra035959.1-P | Field mustard | cytosol, nucleus, plastid | 81.94 | 75.6 |
| Bra009328.1-P | Field mustard | cytosol, nucleus, plastid | 80.65 | 75.3 |
| CDY16839 | Canola | cytosol, nucleus, plastid | 81.94 | 75.15 |
| CDX87185 | Canola | cytosol, nucleus, plastid | 81.94 | 75.15 |
| CDY21520 | Canola | cytosol, nucleus, plastid | 80.0 | 74.7 |
| GSMUA_Achr9P00790_001 | Banana | cytosol, nucleus, peroxisome | 78.06 | 69.94 |
| CDY44761 | Canola | cytosol | 81.29 | 52.5 |
| CDY40760 | Canola | nucleus | 77.42 | 48.39 |
| Bra028668.1-P | Field mustard | nucleus | 52.9 | 42.71 |
| Zm00001d050242_P002 | Maize | plastid | 78.06 | 40.74 |
| EES13767 | Sorghum | nucleus | 78.06 | 40.74 |
| Zm00001d032328_P005 | Maize | extracellular, plastid | 78.06 | 40.2 |
| TraesCS3A01G450700.1 | Wheat | cytosol, mitochondrion, nucleus | 74.19 | 39.52 |
| TraesCS3B01G487800.1 | Wheat | cytosol, mitochondrion, nucleus | 74.19 | 38.85 |
| TraesCS3D01G443500.1 | Wheat | cytosol, mitochondrion, nucleus | 74.19 | 38.59 |
| HORVU3Hr1G097680.4 | Barley | cytosol, mitochondrion, nucleus | 72.26 | 36.48 |
| VIT_06s0004g03490.t01 | Wine grape | nucleus | 23.23 | 27.07 |
| VIT_08s0040g03260.t01 | Wine grape | nucleus | 25.16 | 24.22 |
| VIT_05s0020g01350.t01 | Wine grape | nucleus | 20.65 | 23.19 |
| VIT_13s0019g03600.t01 | Wine grape | nucleus | 25.81 | 22.73 |
| VIT_14s0060g02660.t01 | Wine grape | nucleus | 21.29 | 22.45 |
| VIT_01s0010g01910.t01 | Wine grape | cytosol | 20.65 | 21.05 |
| Os08t0383700-02 | Rice | cytosol, extracellular | 33.55 | 20.97 |
| VIT_07s0104g01640.t01 | Wine grape | nucleus | 21.94 | 19.43 |
| VIT_01s0010g01940.t01 | Wine grape | cytosol | 18.71 | 19.08 |
| VIT_19s0015g00440.t01 | Wine grape | nucleus | 25.81 | 19.05 |
| VIT_00s0259g00180.t01 | Wine grape | nucleus | 24.52 | 18.36 |
| VIT_00s1287g00010.t01 | Wine grape | nucleus | 25.16 | 17.89 |
| VIT_19s0015g00580.t01 | Wine grape | nucleus | 23.23 | 17.22 |
| VIT_00s0956g00020.t01 | Wine grape | nucleus | 23.23 | 17.06 |
| VIT_07s0031g01460.t01 | Wine grape | nucleus | 22.58 | 16.83 |
| VIT_12s0057g01010.t01 | Wine grape | nucleus | 28.39 | 15.07 |
| VIT_19s0015g00590.t01 | Wine grape | cytosol, mitochondrion, nucleus | 20.65 | 14.88 |
Protein Annotations
| Gene3D:1.10.20.10 | EntrezGene:100242295 | wikigene:100242295 | MapMan:15.3.5.7.1.2 | InterPro:CBFA_NFYB_domain | ProteinID:CBI15395 |
| ProteinID:CBI15395.3 | UniProt:D7SIT4 | EMBL:FN594950 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046982 | InterPro:Histone-fold |
| InterPro:IPR009072 | EntrezGene:LOC100242295 | wikigene:LOC100242295 | PFAM:PF00808 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF8 |
| SUPFAM:SSF47113 | TIGR:TC57500 | UniParc:UPI00015C9C31 | ArrayExpress:VIT_17s0000g04350 | EnsemblPlantsGene:VIT_17s0000g04350 | EnsemblPlants:VIT_17s0000g04350.t01 |
| unigene:Vvi.1305 | RefSeq:XP_002272187 | RefSeq:XP_002272187.1 | : | : | : |
Description
No Description!
Coordinates
chr17:-:4554957..4563295
Molecular Weight (calculated)
17340.6 Da
IEP (calculated)
4.320
GRAVY (calculated)
-0.468
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPMDIVGKS KEDASLPKAT MTKIIKEMLP PDVRVARDAQ DLLIECCVEF INLISSESND VCSREEKRTI APEHVLKALE VLGFGEYIEE VYAAYEQHKL
101: ETMDTIKGGK WSNGAEMTEE EALAEQQRMF AEARARMNGG ASIQKQSELD PSLES
101: ETMDTIKGGK WSNGAEMTEE EALAEQQRMF AEARARMNGG ASIQKQSELD PSLES
001: MDPMDIVGKS KEDASLPKAT MTKIIKEMLP PDVRVARDAQ DLLIECCVEF INLVSSESND VCNKEDKRTI APEHVLKALQ VLGFGEYIEE VYAAYEQHKY
101: ETMDTQRSVK WNPGAQMTEE EAAAEQQRMF AEARARMNGG VSVPQPEHPE TDQRSPQS
101: ETMDTQRSVK WNPGAQMTEE EAAAEQQRMF AEARARMNGG VSVPQPEHPE TDQRSPQS
Arabidopsis Description
DR1AT5G23090 protein [Source:UniProtKB/TrEMBL;Acc:B9DHA9]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.