Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400010436 | Potato | cytosol, mitochondrion, nucleus | 90.97 | 89.24 |
| PGSC0003DMT400063256 | Potato | cytosol, nucleus, plastid | 88.39 | 86.16 |
| VIT_17s0000g04350.t01 | Wine grape | cytosol, mitochondrion, nucleus | 81.94 | 81.94 |
| KRH56716 | Soybean | cytosol, mitochondrion, nucleus | 82.58 | 81.53 |
| KRH54787 | Soybean | cytosol, mitochondrion, nucleus | 81.29 | 80.77 |
| KRH03842 | Soybean | cytosol, mitochondrion, nucleus | 82.58 | 80.0 |
| KRH62965 | Soybean | cytosol, nucleus | 54.84 | 79.44 |
| GSMUA_Achr1P20700_001 | Banana | cytosol | 25.81 | 75.47 |
| Bra005976.1-P | Field mustard | cytosol, nucleus, plastid | 74.19 | 75.16 |
| AT5G23090.1 | Thale cress | cytosol, nucleus, plastid | 76.77 | 74.84 |
| CDX69967 | Canola | cytosol, nucleus, plastid | 79.35 | 74.55 |
| AT5G08190.1 | Thale cress | cytosol, nucleus, plastid | 78.06 | 74.23 |
| Bra009328.1-P | Field mustard | cytosol, nucleus, plastid | 79.35 | 74.1 |
| GSMUA_Achr1P20710_001 | Banana | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 56.13 | 73.73 |
| CDY21520 | Canola | cytosol, nucleus, plastid | 78.71 | 73.49 |
| Bra035959.1-P | Field mustard | cytosol, nucleus, plastid | 78.71 | 72.62 |
| CDY16839 | Canola | cytosol, nucleus, plastid | 78.71 | 72.19 |
| CDX87185 | Canola | cytosol, nucleus, plastid | 78.71 | 72.19 |
| GSMUA_Achr9P00790_001 | Banana | cytosol, nucleus, peroxisome | 74.19 | 66.47 |
| CDY44761 | Canola | cytosol | 78.06 | 50.42 |
| CDY40760 | Canola | nucleus | 77.42 | 48.39 |
| Bra028668.1-P | Field mustard | nucleus | 50.32 | 40.62 |
| Zm00001d050242_P002 | Maize | plastid | 71.61 | 37.37 |
| EES13767 | Sorghum | nucleus | 71.61 | 37.37 |
| TraesCS3A01G450700.1 | Wheat | cytosol, mitochondrion, nucleus | 69.03 | 36.77 |
| Zm00001d032328_P005 | Maize | extracellular, plastid | 70.97 | 36.54 |
| TraesCS3B01G487800.1 | Wheat | cytosol, mitochondrion, nucleus | 69.03 | 36.15 |
| TraesCS3D01G443500.1 | Wheat | cytosol, mitochondrion, nucleus | 69.03 | 35.91 |
| HORVU3Hr1G097680.4 | Barley | cytosol, mitochondrion, nucleus | 67.1 | 33.88 |
| PGSC0003DMT400034611 | Potato | mitochondrion | 20.65 | 26.67 |
| PGSC0003DMT400082465 | Potato | nucleus | 21.94 | 25.76 |
| PGSC0003DMT400035193 | Potato | cytosol, extracellular, nucleus | 10.97 | 25.76 |
| PGSC0003DMT400004366 | Potato | nucleus | 23.23 | 25.71 |
| PGSC0003DMT400058414 | Potato | nucleus | 21.29 | 24.26 |
| PGSC0003DMT400029608 | Potato | nucleus | 21.29 | 23.08 |
| PGSC0003DMT400035117 | Potato | nucleus | 24.52 | 21.23 |
| PGSC0003DMT400079574 | Potato | cytosol | 18.06 | 20.74 |
| PGSC0003DMT400057066 | Potato | nucleus | 24.52 | 20.54 |
| PGSC0003DMT400063671 | Potato | nucleus | 18.06 | 20.29 |
| Os08t0383700-02 | Rice | cytosol, extracellular | 32.26 | 20.16 |
| PGSC0003DMT400010977 | Potato | nucleus | 25.16 | 19.21 |
| PGSC0003DMT400035119 | Potato | nucleus | 19.35 | 18.63 |
| PGSC0003DMT400037958 | Potato | nucleus | 21.29 | 18.54 |
| PGSC0003DMT400084724 | Potato | endoplasmic reticulum, extracellular | 22.58 | 17.68 |
| PGSC0003DMT400035125 | Potato | cytosol | 21.29 | 17.46 |
| PGSC0003DMT400095009 | Potato | nucleus | 20.0 | 16.23 |
| PGSC0003DMT400043176 | Potato | nucleus | 19.35 | 15.15 |
| PGSC0003DMT400035129 | Potato | nucleus | 21.29 | 14.73 |
| PGSC0003DMT400035028 | Potato | nucleus | 10.97 | 13.82 |
| PGSC0003DMT400057379 | Potato | nucleus | 14.19 | 12.72 |
| PGSC0003DMT400035121 | Potato | nucleus | 11.61 | 11.69 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400059368 | EnsemblPlantsGene:PGSC0003DMG400023065 | Gene3D:1.10.20.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046982 | InterPro:CBFA_NFYB_domain |
| InterPro:Histone-fold | InterPro:IPR009072 | ncoils:Coil | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF8 | PFAM:PF00808 |
| PGSC:PGSC0003DMG400023065 | SUPFAM:SSF47113 | UniParc:UPI0002967AD1 | UniProt:M1C462 | MapMan:15.3.5.7.1.2 | : |
Description
TATA-binding protein-associated phosphoprotein [Source:PGSC_GENE;Acc:PGSC0003DMG400023065]
Coordinates
chr12:+:43499662..43504846
Molecular Weight (calculated)
17445.7 Da
IEP (calculated)
4.353
GRAVY (calculated)
-0.474
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIVGRTKED ASLPKATMTK IIKEMLPPDV RVARDTQDLL IDCCVEFINL ISSESNEVCN REERRTIAPE HVLKALEVLG FGEYIEEVYA AYEQHRLETV
101: DTVRAGKCSN VAEMTEEEAL AEQQRMFAEA RARMNGGVTV PSKQPDSEVD QNLNN
101: DTVRAGKCSN VAEMTEEEAL AEQQRMFAEA RARMNGGVTV PSKQPDSEVD QNLNN
001: MDPMDIVGKS KEDASLPKAT MTKIIKEMLP PDVRVARDAQ DLLIECCVEF INLVSSESND VCNKEDKRTI APEHVLKALQ VLGFGEYIEE VYAAYEQHKY
101: ETMDTQRSVK WNPGAQMTEE EAAAEQQRMF AEARARMNGG VSVPQPEHPE TDQRSPQS
101: ETMDTQRSVK WNPGAQMTEE EAAAEQQRMF AEARARMNGG VSVPQPEHPE TDQRSPQS
Arabidopsis Description
DR1AT5G23090 protein [Source:UniProtKB/TrEMBL;Acc:B9DHA9]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.