Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009328.1-P | Field mustard | cytosol, nucleus, plastid | 100.0 | 99.4 |
| CDY21520 | Canola | cytosol, nucleus, plastid | 97.58 | 96.99 |
| AT5G08190.1 | Thale cress | cytosol, nucleus, plastid | 91.52 | 92.64 |
| KRH56716 | Soybean | cytosol, mitochondrion, nucleus | 80.0 | 84.08 |
| CDY16839 | Canola | cytosol, nucleus, plastid | 86.06 | 84.02 |
| CDX87185 | Canola | cytosol, nucleus, plastid | 86.06 | 84.02 |
| KRH03842 | Soybean | cytosol, mitochondrion, nucleus | 80.0 | 82.5 |
| PGSC0003DMT400010436 | Potato | cytosol, mitochondrion, nucleus | 78.18 | 81.65 |
| GSMUA_Achr1P20700_001 | Banana | cytosol | 26.06 | 81.13 |
| VIT_17s0000g04350.t01 | Wine grape | cytosol, mitochondrion, nucleus | 75.76 | 80.65 |
| KRH54787 | Soybean | cytosol, mitochondrion, nucleus | 75.15 | 79.49 |
| Solyc06g069310.2.1 | Tomato | cytosol, mitochondrion, nucleus | 63.03 | 79.39 |
| PGSC0003DMT400059368 | Potato | cytosol | 74.55 | 79.35 |
| PGSC0003DMT400063256 | Potato | cytosol, nucleus, plastid | 75.76 | 78.62 |
| Solyc03g114400.2.1 | Tomato | cytosol, nucleus, plastid | 60.0 | 75.0 |
| KRH62965 | Soybean | cytosol, nucleus | 48.48 | 74.77 |
| GSMUA_Achr1P20710_001 | Banana | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 51.52 | 72.03 |
| GSMUA_Achr9P00790_001 | Banana | cytosol, nucleus, peroxisome | 69.09 | 65.9 |
| CDY44761 | Canola | cytosol | 92.73 | 63.75 |
| CDY40760 | Canola | nucleus | 90.3 | 60.08 |
| TraesCS3A01G450700.1 | Wheat | cytosol, mitochondrion, nucleus | 68.48 | 38.83 |
| EES13767 | Sorghum | nucleus | 69.7 | 38.72 |
| Zm00001d050242_P002 | Maize | plastid | 69.7 | 38.72 |
| Zm00001d032328_P005 | Maize | extracellular, plastid | 69.7 | 38.21 |
| TraesCS3B01G487800.1 | Wheat | cytosol, mitochondrion, nucleus | 68.48 | 38.18 |
| TraesCS3D01G443500.1 | Wheat | cytosol, mitochondrion, nucleus | 68.48 | 37.92 |
| HORVU3Hr1G097680.4 | Barley | cytosol, mitochondrion, nucleus | 66.06 | 35.5 |
| CDX74880 | Canola | nucleus | 23.64 | 27.46 |
| CDY07691 | Canola | nucleus | 24.85 | 24.7 |
| CDY14422 | Canola | nucleus | 24.24 | 24.39 |
| CDY21888 | Canola | nucleus | 22.42 | 23.57 |
| CDX95014 | Canola | nucleus | 18.79 | 23.48 |
| CDY20167 | Canola | nucleus | 22.42 | 23.42 |
| CDY18462 | Canola | nucleus | 24.24 | 22.86 |
| CDY41061 | Canola | nucleus | 25.45 | 22.83 |
| CDY40552 | Canola | nucleus | 25.45 | 22.7 |
| CDY28916 | Canola | nucleus | 25.45 | 22.58 |
| CDY25955 | Canola | nucleus | 25.45 | 22.46 |
| CDY30123 | Canola | nucleus | 22.42 | 22.42 |
| Os08t0383700-02 | Rice | cytosol, extracellular | 31.52 | 20.97 |
| CDY72254 | Canola | nucleus | 23.64 | 20.97 |
| CDY53021 | Canola | nucleus | 19.39 | 20.65 |
| CDY18460 | Canola | nucleus | 24.24 | 20.62 |
| CDX83320 | Canola | nucleus | 19.39 | 20.51 |
| CDX75855 | Canola | nucleus | 23.03 | 20.43 |
| CDX82424 | Canola | nucleus | 23.03 | 20.11 |
| CDX91501 | Canola | nucleus | 23.64 | 18.4 |
| CDX80136 | Canola | nucleus | 18.79 | 18.02 |
| CDY25952 | Canola | nucleus | 22.42 | 17.87 |
| CDX93117 | Canola | nucleus | 22.42 | 17.7 |
| CDX89608 | Canola | nucleus | 22.42 | 17.7 |
| CDY41063 | Canola | nucleus | 22.42 | 17.7 |
| CDX77785 | Canola | cytosol | 13.94 | 17.16 |
| CDX79714 | Canola | nucleus | 23.03 | 17.12 |
| CDX73560 | Canola | nucleus | 23.64 | 17.03 |
| CDY17715 | Canola | nucleus | 23.03 | 16.45 |
| CDX81449 | Canola | nucleus | 20.61 | 16.35 |
| CDY37212 | Canola | nucleus | 20.61 | 16.35 |
| CDY00411 | Canola | nucleus | 21.21 | 15.22 |
| CDX78169 | Canola | nucleus | 23.64 | 15.18 |
| CDY01304 | Canola | nucleus | 21.21 | 15.15 |
| CDY46752 | Canola | nucleus | 24.24 | 14.98 |
| CDY38832 | Canola | nucleus | 18.79 | 13.54 |
| CDY68650 | Canola | nucleus | 21.21 | 11.67 |
| CDY30639 | Canola | nucleus | 21.82 | 10.53 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.3.5.7.1.2 | GO:A0A078BZW8 | InterPro:CBFA_NFYB_domain | EnsemblPlants:CDX69967 | ProteinID:CDX69967 |
| ProteinID:CDX69967.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046982 | EnsemblPlantsGene:GSBRNA2T00136053001 |
| InterPro:Histone-fold | InterPro:IPR009072 | PFAM:PF00808 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF8 | SUPFAM:SSF47113 |
| UniParc:UPI0004EED880 | SEG:seg | : | : | : | : |
Description
BnaA10g23160D
Coordinates
chrLK031790:-:2509203..2510367
Molecular Weight (calculated)
18429.7 Da
IEP (calculated)
4.284
GRAVY (calculated)
-0.624
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPMDIVGKS KEDASLPKAT MTKIIKEMLP ADVRVARDAQ DLLIECCVEF INLISSESNE VCNKEDKRTI APEHVLKALQ VLGFGEYVEE VYAAYEQHRY
101: ETMQDSQRSV KMNSGAEMTE EEAAAEQQRM FAEARARMNG GGGVSVPQPD PEQQVDTQQQ SNLQS
101: ETMQDSQRSV KMNSGAEMTE EEAAAEQQRM FAEARARMNG GGGVSVPQPD PEQQVDTQQQ SNLQS
001: MDPMDIVGKS KEDASLPKAT MTKIIKEMLP PDVRVARDAQ DLLIECCVEF INLVSSESND VCNKEDKRTI APEHVLKALQ VLGFGEYIEE VYAAYEQHKY
101: ETMQDTQRSV KWNPGAQMTE EEAAAEQQRM FAEARARMNG GVSVPQPEHP ETDQRSPQS
101: ETMQDTQRSV KWNPGAQMTE EEAAAEQQRM FAEARARMNG GVSVPQPEHP ETDQRSPQS
Arabidopsis Description
DR1AT5G23090 protein [Source:UniProtKB/TrEMBL;Acc:B9DHA9]
SUBAcon: [cytosol,nucleus,plastid]
SUBAcon: [cytosol,nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.