Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028668.1-P | Field mustard | nucleus | 76.21 | 98.44 |
| CDY21520 | Canola | cytosol, nucleus, plastid | 60.48 | 90.36 |
| CDX69967 | Canola | cytosol, nucleus, plastid | 60.08 | 90.3 |
| AT5G08190.1 | Thale cress | cytosol, nucleus, plastid | 58.47 | 88.96 |
| KRH56716 | Soybean | cytosol, mitochondrion, nucleus | 51.21 | 80.89 |
| CDY16839 | Canola | cytosol, nucleus, plastid | 54.44 | 79.88 |
| CDX87185 | Canola | cytosol, nucleus, plastid | 54.44 | 79.88 |
| KRH03842 | Soybean | cytosol, mitochondrion, nucleus | 51.21 | 79.38 |
| PGSC0003DMT400010436 | Potato | cytosol, mitochondrion, nucleus | 50.0 | 78.48 |
| Solyc06g069310.2.1 | Tomato | cytosol, mitochondrion, nucleus | 41.13 | 77.86 |
| PGSC0003DMT400059368 | Potato | cytosol | 48.39 | 77.42 |
| VIT_17s0000g04350.t01 | Wine grape | cytosol, mitochondrion, nucleus | 48.39 | 77.42 |
| KRH54787 | Soybean | cytosol, mitochondrion, nucleus | 47.98 | 76.28 |
| PGSC0003DMT400063256 | Potato | cytosol, nucleus, plastid | 48.79 | 76.1 |
| GSMUA_Achr1P20700_001 | Banana | cytosol | 16.13 | 75.47 |
| Solyc03g114400.2.1 | Tomato | cytosol, nucleus, plastid | 39.52 | 74.24 |
| KRH62965 | Soybean | cytosol, nucleus | 31.45 | 72.9 |
| CDY44761 | Canola | cytosol | 68.15 | 70.42 |
| GSMUA_Achr1P20710_001 | Banana | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 33.06 | 69.49 |
| GSMUA_Achr9P00790_001 | Banana | cytosol, nucleus, peroxisome | 44.35 | 63.58 |
| TraesCS3A01G450700.1 | Wheat | cytosol, mitochondrion, nucleus | 43.95 | 37.46 |
| EES13767 | Sorghum | nucleus | 44.35 | 37.04 |
| Zm00001d050242_P002 | Maize | plastid | 44.35 | 37.04 |
| TraesCS3B01G487800.1 | Wheat | cytosol, mitochondrion, nucleus | 43.95 | 36.82 |
| TraesCS3D01G443500.1 | Wheat | cytosol, mitochondrion, nucleus | 43.95 | 36.58 |
| Zm00001d032328_P005 | Maize | extracellular, plastid | 44.35 | 36.54 |
| HORVU3Hr1G097680.4 | Barley | cytosol, mitochondrion, nucleus | 42.34 | 34.2 |
| CDX74880 | Canola | nucleus | 14.92 | 26.06 |
| CDY07691 | Canola | nucleus | 15.73 | 23.49 |
| CDY14422 | Canola | nucleus | 15.32 | 23.17 |
| CDY21888 | Canola | nucleus | 14.11 | 22.29 |
| CDY20167 | Canola | nucleus | 14.11 | 22.15 |
| CDX95014 | Canola | nucleus | 11.69 | 21.97 |
| CDY30123 | Canola | nucleus | 14.52 | 21.82 |
| CDY41061 | Canola | nucleus | 16.13 | 21.74 |
| CDY18462 | Canola | nucleus | 15.32 | 21.71 |
| CDY40552 | Canola | nucleus | 16.13 | 21.62 |
| CDY28916 | Canola | nucleus | 16.13 | 21.51 |
| CDY25955 | Canola | nucleus | 16.13 | 21.39 |
| Os08t0383700-02 | Rice | cytosol, extracellular | 20.56 | 20.56 |
| CDX75855 | Canola | nucleus | 14.92 | 19.89 |
| CDY72254 | Canola | nucleus | 14.92 | 19.89 |
| CDY18460 | Canola | nucleus | 15.32 | 19.59 |
| CDX82424 | Canola | nucleus | 14.92 | 19.58 |
| CDY53021 | Canola | nucleus | 12.1 | 19.35 |
| CDX83320 | Canola | nucleus | 12.1 | 19.23 |
| CDX79714 | Canola | nucleus | 16.13 | 18.02 |
| CDX91501 | Canola | nucleus | 14.92 | 17.45 |
| CDX73560 | Canola | nucleus | 15.73 | 17.03 |
| CDY25952 | Canola | nucleus | 14.11 | 16.91 |
| CDX80136 | Canola | nucleus | 11.69 | 16.86 |
| CDY41063 | Canola | nucleus | 14.11 | 16.75 |
| CDX93117 | Canola | nucleus | 13.71 | 16.27 |
| CDX89608 | Canola | nucleus | 13.71 | 16.27 |
| CDX77785 | Canola | cytosol | 8.47 | 15.67 |
| CDY17715 | Canola | nucleus | 14.52 | 15.58 |
| CDX78169 | Canola | nucleus | 16.13 | 15.56 |
| CDY46752 | Canola | nucleus | 16.53 | 15.36 |
| CDX81449 | Canola | nucleus | 12.5 | 14.9 |
| CDY37212 | Canola | nucleus | 12.5 | 14.9 |
| CDY00411 | Canola | nucleus | 13.31 | 14.35 |
| CDY01304 | Canola | nucleus | 13.31 | 14.29 |
| CDY38832 | Canola | nucleus | 11.29 | 12.23 |
| CDY68650 | Canola | nucleus | 13.71 | 11.33 |
| CDY30639 | Canola | nucleus | 13.71 | 9.94 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.3.5.7.1.2 | GO:A0A078HQ88 | UniProt:A0A078HQ88 | InterPro:CBFA_NFYB_domain | EnsemblPlants:CDY40760 |
| ProteinID:CDY40760 | ProteinID:CDY40760.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046982 | EnsemblPlantsGene:GSBRNA2T00071657001 | InterPro:Histone-fold |
| InterPro:IPR009072 | PFAM:PF00808 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF8 | SUPFAM:SSF47113 | UniParc:UPI0004EDD103 |
| SEG:seg | : | : | : | : | : |
Description
BnaAnng06230DBnaAnng06230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HQ88]
Coordinates
chrLK032478:-:139032..140974
Molecular Weight (calculated)
28400.1 Da
IEP (calculated)
7.236
GRAVY (calculated)
-0.577
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MHNNTVRLEK EQSYKKILYA LKELKWRIHA HFFIHGTKTE NNIIGPLFGQ SQTKKGTYKM NQHNVIHGTS NLPLSFIIVF KLRFCREIKT MDLVGKSKED
101: ASLPKATMTK IIKEMLPADV RVARDAQDLL IECCVEFINL ISSESNEVCN KEDKRTIAPE HVLKALQVLG FGEYVEEVYS AYEQHKYETM QDSQRSVKMN
201: TGAEMTEEEA ATEQQRMFAE ARARMNGGGV SVPQPEQQLD TQQSNLQN
101: ASLPKATMTK IIKEMLPADV RVARDAQDLL IECCVEFINL ISSESNEVCN KEDKRTIAPE HVLKALQVLG FGEYVEEVYS AYEQHKYETM QDSQRSVKMN
201: TGAEMTEEEA ATEQQRMFAE ARARMNGGGV SVPQPEQQLD TQQSNLQN
001: MDPMDIVGKS KEDASLPKAT MTKIIKEMLP ADVRVARDAQ DLLIECCVEF INLISSESNE VCNKEDKRTI APEHVLKALQ VLGFGEYVEE VYAAYEQHKY
101: ETMQDSQRSV KMNSGAEMTE EEAAAEQQRM FAEARARMNG GVTVPQPEQL EEPQQQQQTS LQS
101: ETMQDSQRSV KMNSGAEMTE EEAAAEQQRM FAEARARMNG GVTVPQPEQL EEPQQQQQTS LQS
Arabidopsis Description
NF-YB12NF-YB12 [Source:UniProtKB/TrEMBL;Acc:A0A178UHP2]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.