Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023095.1-P | Field mustard | nucleus | 74.53 | 99.5 |
| AT2G37060.2 | Thale cress | nucleus | 58.05 | 89.6 |
| CDY18462 | Canola | nucleus | 58.05 | 88.57 |
| CDX79714 | Canola | nucleus | 70.41 | 84.68 |
| CDY72254 | Canola | nucleus | 53.18 | 76.34 |
| CDY18460 | Canola | nucleus | 55.43 | 76.29 |
| PGSC0003DMT400004366 | Potato | nucleus | 39.33 | 75.0 |
| Solyc09g007290.2.1 | Tomato | nucleus | 35.96 | 74.42 |
| VIT_08s0040g03260.t01 | Wine grape | nucleus | 44.57 | 73.91 |
| CDX74880 | Canola | nucleus | 37.08 | 69.72 |
| KXG22176 | Sorghum | nucleus | 44.19 | 65.56 |
| Zm00001d038397_P005 | Maize | nucleus | 43.45 | 65.17 |
| CDY07691 | Canola | nucleus | 39.33 | 63.25 |
| GSMUA_Achr8P17450_001 | Banana | nucleus | 45.69 | 62.89 |
| Os05t0463800-02 | Rice | nucleus | 43.45 | 62.7 |
| CDX73560 | Canola | nucleus | 53.56 | 62.45 |
| TraesCS7A01G486400.1 | Wheat | cytosol | 24.72 | 62.26 |
| CDY21888 | Canola | nucleus | 36.33 | 61.78 |
| CDY20167 | Canola | nucleus | 36.33 | 61.39 |
| TraesCS7B01G501400.1 | Wheat | cytoskeleton, cytosol, nucleus | 25.84 | 60.53 |
| Zm00001d010574_P001 | Maize | nucleus | 42.32 | 60.43 |
| CDY14422 | Canola | nucleus | 36.7 | 59.76 |
| TraesCS1D01G287500.1 | Wheat | nucleus | 40.45 | 59.34 |
| TraesCS1A01G288500.3 | Wheat | nucleus | 40.45 | 59.34 |
| TraesCS1B01G297900.2 | Wheat | nucleus | 40.07 | 58.79 |
| CDY30123 | Canola | nucleus | 35.96 | 58.18 |
| CDX78169 | Canola | nucleus | 55.43 | 57.59 |
| TraesCS5B01G454900.1 | Wheat | cytoskeleton, cytosol, nucleus | 25.84 | 56.56 |
| CDY41061 | Canola | nucleus | 36.33 | 52.72 |
| CDX75855 | Canola | nucleus | 36.7 | 52.69 |
| CDY25955 | Canola | nucleus | 36.7 | 52.41 |
| CDX82424 | Canola | nucleus | 36.7 | 51.85 |
| CDY40552 | Canola | nucleus | 35.58 | 51.35 |
| CDY28916 | Canola | nucleus | 35.58 | 51.08 |
| CDX91501 | Canola | nucleus | 38.58 | 48.58 |
| CDX95014 | Canola | nucleus | 23.22 | 46.97 |
| CDY53021 | Canola | nucleus | 26.59 | 45.81 |
| CDX83320 | Canola | nucleus | 26.59 | 45.51 |
| HORVU1Hr1G071620.5 | Barley | nucleus, plastid | 41.57 | 44.05 |
| CDX77785 | Canola | cytosol | 21.35 | 42.54 |
| CDX89608 | Canola | nucleus | 32.58 | 41.63 |
| CDX93117 | Canola | nucleus | 32.58 | 41.63 |
| CDY37212 | Canola | nucleus | 32.21 | 41.35 |
| CDX80136 | Canola | nucleus | 26.22 | 40.7 |
| CDX81449 | Canola | nucleus | 31.46 | 40.38 |
| CDY25952 | Canola | nucleus | 28.09 | 36.23 |
| CDY41063 | Canola | nucleus | 28.09 | 35.89 |
| CDY17715 | Canola | nucleus | 28.46 | 32.9 |
| CDY00411 | Canola | nucleus | 25.84 | 30.0 |
| CDY01304 | Canola | nucleus | 25.84 | 29.87 |
| CDX69967 | Canola | cytosol, nucleus, plastid | 14.98 | 24.24 |
| CDY21520 | Canola | cytosol, nucleus, plastid | 14.98 | 24.1 |
| CDY38832 | Canola | nucleus | 19.85 | 23.14 |
| CDY16839 | Canola | cytosol, nucleus, plastid | 14.61 | 23.08 |
| CDX87185 | Canola | cytosol, nucleus, plastid | 14.61 | 23.08 |
| CDY68650 | Canola | nucleus | 24.72 | 22.0 |
| CDY30639 | Canola | nucleus | 25.47 | 19.88 |
| CDY44761 | Canola | cytosol | 15.73 | 17.5 |
| CDY40760 | Canola | nucleus | 15.36 | 16.53 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.5.51.2 | GO:A0A078I9E0 | UniProt:A0A078I9E0 | InterPro:CBFA_NFYB_domain | EnsemblPlants:CDY46752 |
| ProteinID:CDY46752 | ProteinID:CDY46752.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| GO:GO:0046982 | EnsemblPlantsGene:GSBRNA2T00086075001 | InterPro:Histone-fold | InterPro:IPR009072 | PFAM:PF00808 | PRINTS:PR00615 |
| ScanProsite:PS00685 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF85 | SUPFAM:SSF47113 | InterPro:Transcrpt_fac_NFYB/HAP3_CS | UniParc:UPI0004EE5B25 |
Description
BnaA03g16960DBnaA03g16960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I9E0]
Coordinates
chrLK032684:+:75809..77928
Molecular Weight (calculated)
29516.9 Da
IEP (calculated)
9.083
GRAVY (calculated)
-0.563
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MNQRGKEEKG GILNNKEKNE RFSISLVSQA SDQISPFSRS LFPASFPSSS NQHLSISLPP FFRILLLMAE SQAKSPGGGE SGGDQSPRSS SHVREQDRFL
101: PIANISRIMK RGLPANGKIA KDAKEIVQEC VSEFISFITS EASDKCQREK RKTINGDDLL WAMATLGFED YIDPLKVYLT RYRERVFGFH SLTLFFPFIF
201: LRHELGTLQM EGDTKGSAKG GDANAKKDGQ SSQNGQFSQL AHQGSFPQGP YGSSQGQHMM VPMPGTD
101: PIANISRIMK RGLPANGKIA KDAKEIVQEC VSEFISFITS EASDKCQREK RKTINGDDLL WAMATLGFED YIDPLKVYLT RYRERVFGFH SLTLFFPFIF
201: LRHELGTLQM EGDTKGSAKG GDANAKKDGQ SSQNGQFSQL AHQGSFPQGP YGSSQGQHMM VPMPGTD
001: MAESQAKSPG GCGSHESGGD QSPRSLHVRE QDRFLPIANI SRIMKRGLPA NGKIAKDAKE IVQECVSEFI SFVTSEASDK CQREKRKTIN GDDLLWAMAT
101: LGFEDYMEPL KVYLMRYREM EGDTKGSAKG GDPNAKKDGQ SSQNGQFSQL AHQGPYGNSQ AQQHMMVPMP GTD
101: LGFEDYMEPL KVYLMRYREM EGDTKGSAKG GDPNAKKDGQ SSQNGQFSQL AHQGPYGNSQ AQQHMMVPMP GTD
Arabidopsis Description
NFYB8Nuclear transcription factor Y subunit B-8 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYK4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.