Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_06s0004g03490.t01 | Wine grape | nucleus | 67.08 | 81.2 |
| PGSC0003DMT400004366 | Potato | nucleus | 62.11 | 71.43 |
| VIT_13s0019g03600.t01 | Wine grape | nucleus | 73.91 | 67.61 |
| Solyc09g007290.2.1 | Tomato | nucleus | 53.42 | 66.67 |
| AT2G37060.2 | Thale cress | nucleus | 71.43 | 66.47 |
| KXG22176 | Sorghum | nucleus | 73.29 | 65.56 |
| AT3G53340.5 | Thale cress | nucleus | 70.81 | 64.77 |
| Zm00001d038397_P005 | Maize | nucleus | 71.43 | 64.61 |
| CDY18462 | Canola | nucleus | 70.19 | 64.57 |
| Bra006991.1-P | Field mustard | nucleus | 69.57 | 62.92 |
| Zm00001d010574_P001 | Maize | nucleus | 72.05 | 62.03 |
| Os05t0463800-02 | Rice | nucleus | 70.81 | 61.62 |
| TraesCS7A01G486400.1 | Wheat | cytosol | 40.37 | 61.32 |
| GSMUA_Achr8P17450_001 | Banana | nucleus | 73.29 | 60.82 |
| Bra023095.1-P | Field mustard | nucleus | 73.91 | 59.5 |
| Bra017209.1-P | Field mustard | nucleus | 70.19 | 59.16 |
| CDY72254 | Canola | nucleus | 68.32 | 59.14 |
| TraesCS7B01G501400.1 | Wheat | cytoskeleton, cytosol, nucleus | 41.61 | 58.77 |
| CDY18460 | Canola | nucleus | 70.19 | 58.25 |
| TraesCS1D01G287500.1 | Wheat | nucleus | 65.84 | 58.24 |
| TraesCS1A01G288500.3 | Wheat | nucleus | 65.22 | 57.69 |
| TraesCS1B01G297900.2 | Wheat | nucleus | 65.22 | 57.69 |
| TraesCS5B01G454900.1 | Wheat | cytoskeleton, cytosol, nucleus | 40.99 | 54.1 |
| CDX79714 | Canola | nucleus | 72.67 | 52.7 |
| VIT_05s0020g01350.t01 | Wine grape | nucleus | 44.1 | 51.45 |
| CDX73560 | Canola | nucleus | 69.57 | 48.91 |
| VIT_19s0015g00440.t01 | Wine grape | nucleus | 58.39 | 44.76 |
| CDY46752 | Canola | nucleus | 73.91 | 44.57 |
| VIT_00s0259g00180.t01 | Wine grape | nucleus | 56.52 | 43.96 |
| CDX78169 | Canola | nucleus | 69.57 | 43.58 |
| HORVU1Hr1G071620.5 | Barley | nucleus, plastid | 65.84 | 42.06 |
| VIT_00s1287g00010.t01 | Wine grape | nucleus | 56.52 | 41.74 |
| VIT_14s0060g02660.t01 | Wine grape | nucleus | 37.89 | 41.5 |
| VIT_07s0104g01640.t01 | Wine grape | nucleus | 44.72 | 41.14 |
| VIT_01s0010g01910.t01 | Wine grape | cytosol | 38.51 | 40.79 |
| VIT_07s0031g01460.t01 | Wine grape | nucleus | 50.93 | 39.42 |
| VIT_01s0010g01940.t01 | Wine grape | cytosol | 33.54 | 35.53 |
| VIT_12s0057g01010.t01 | Wine grape | nucleus | 58.39 | 32.19 |
| VIT_00s0956g00020.t01 | Wine grape | nucleus | 41.61 | 31.75 |
| VIT_19s0015g00580.t01 | Wine grape | nucleus | 36.65 | 28.23 |
| VIT_19s0015g00590.t01 | Wine grape | cytosol, mitochondrion, nucleus | 34.16 | 25.58 |
| VIT_17s0000g04350.t01 | Wine grape | cytosol, mitochondrion, nucleus | 24.22 | 25.16 |
Protein Annotations
| Gene3D:1.10.20.10 | EntrezGene:100265391 | wikigene:100265391 | MapMan:15.5.51.2 | InterPro:CBFA_NFYB_domain | ProteinID:CBI32616 |
| ProteinID:CBI32616.3 | UniProt:D7TQ96 | EMBL:FN596008 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | GO:GO:0046982 | InterPro:Histone-fold | InterPro:IPR009072 | EntrezGene:LOC100265391 | wikigene:LOC100265391 |
| PFAM:PF00808 | PRINTS:PR00615 | ScanProsite:PS00685 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF85 | SUPFAM:SSF47113 |
| InterPro:Transcrpt_fac_NFYB/HAP3_CS | UniParc:UPI0001BE3D8A | ArrayExpress:VIT_08s0040g03260 | EnsemblPlantsGene:VIT_08s0040g03260 | EnsemblPlants:VIT_08s0040g03260.t01 | RefSeq:XP_002273231 |
| RefSeq:XP_002273231.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr8:+:14202718..14207335
Molecular Weight (calculated)
17581.5 Da
IEP (calculated)
6.117
GRAVY (calculated)
-0.716
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MADAAASPGE GSHESGEQIP HSNVREQDRF LPIANISRIM KKALPANGKI AKDAKEIMQE CVSEFISFIT SEASDKCQRE KRKTINGDDL LWAMATLGFE
101: DYIDPLKLYL AAYREGDTKG PAKGGDGPAR KDAAGAQSSI NSHISHQGPY TQNVNYETPQ R
101: DYIDPLKLYL AAYREGDTKG PAKGGDGPAR KDAAGAQSSI NSHISHQGPY TQNVNYETPQ R
001: MAESQAKSPG GCGSHESGGD QSPRSLHVRE QDRFLPIANI SRIMKRGLPA NGKIAKDAKE IVQECVSEFI SFVTSEASDK CQREKRKTIN GDDLLWAMAT
101: LGFEDYMEPL KVYLMRYREM EGDTKGSAKG GDPNAKKDGQ SSQNGQFSQL AHQGPYGNSQ AQQHMMVPMP GTD
101: LGFEDYMEPL KVYLMRYREM EGDTKGSAKG GDPNAKKDGQ SSQNGQFSQL AHQGPYGNSQ AQQHMMVPMP GTD
Arabidopsis Description
NFYB8Nuclear transcription factor Y subunit B-8 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYK4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.