Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d038397_P005 | Maize | nucleus | 95.56 | 96.63 |
| Os05t0463800-02 | Rice | nucleus | 94.44 | 91.89 |
| Zm00001d010574_P001 | Maize | nucleus | 91.67 | 88.24 |
| TraesCS1D01G287500.1 | Wheat | nucleus | 86.67 | 85.71 |
| TraesCS1B01G297900.2 | Wheat | nucleus | 86.11 | 85.16 |
| VIT_06s0004g03490.t01 | Wine grape | nucleus | 62.78 | 84.96 |
| TraesCS1A01G288500.3 | Wheat | nucleus | 85.56 | 84.62 |
| OQU87808 | Sorghum | nucleus | 76.11 | 83.03 |
| PGSC0003DMT400004366 | Potato | nucleus | 60.0 | 77.14 |
| KRH32395 | Soybean | nucleus | 66.67 | 75.0 |
| Solyc04g009520.2.1 | Tomato | nucleus | 35.56 | 74.42 |
| CDX74880 | Canola | nucleus | 58.33 | 73.94 |
| VIT_08s0040g03260.t01 | Wine grape | nucleus | 65.56 | 73.29 |
| Bra005074.1-P | Field mustard | nucleus | 57.78 | 73.24 |
| PGSC0003DMT400082465 | Potato | nucleus | 52.22 | 71.21 |
| Solyc09g007290.2.1 | Tomato | nucleus | 50.56 | 70.54 |
| VIT_13s0019g03600.t01 | Wine grape | nucleus | 67.78 | 69.32 |
| GSMUA_Achr8P17450_001 | Banana | nucleus | 74.44 | 69.07 |
| Solyc04g049910.2.1 | Tomato | nucleus | 62.78 | 68.48 |
| AT2G37060.2 | Thale cress | nucleus | 65.0 | 67.63 |
| AT2G38880.8 | Thale cress | nucleus | 58.33 | 64.02 |
| AT3G53340.5 | Thale cress | nucleus | 62.22 | 63.64 |
| CDY18462 | Canola | nucleus | 61.67 | 63.43 |
| Bra006991.1-P | Field mustard | nucleus | 62.22 | 62.92 |
| CDY07691 | Canola | nucleus | 56.11 | 60.84 |
| HORVU1Hr1G071620.5 | Barley | nucleus, plastid | 85.0 | 60.71 |
| Bra023095.1-P | Field mustard | nucleus | 65.56 | 59.0 |
| Bra017209.1-P | Field mustard | nucleus | 62.22 | 58.64 |
| CDY72254 | Canola | nucleus | 60.0 | 58.06 |
| CDY18460 | Canola | nucleus | 62.22 | 57.73 |
| CDY14422 | Canola | nucleus | 51.67 | 56.71 |
| OQU78466 | Sorghum | nucleus | 39.44 | 51.82 |
| CDX79714 | Canola | nucleus | 63.89 | 51.8 |
| CDX91501 | Canola | nucleus | 59.44 | 50.47 |
| CDX73560 | Canola | nucleus | 62.22 | 48.91 |
| CDY46752 | Canola | nucleus | 65.56 | 44.19 |
| EER99684 | Sorghum | nucleus | 53.33 | 44.04 |
| CDX78169 | Canola | nucleus | 62.22 | 43.58 |
| EER94693 | Sorghum | nucleus | 54.44 | 43.56 |
| EES04176 | Sorghum | nucleus | 41.11 | 40.66 |
| OQU88166 | Sorghum | cytosol, mitochondrion, nucleus | 30.56 | 37.67 |
| EES14637 | Sorghum | nucleus | 50.0 | 32.73 |
| KXG30848 | Sorghum | nucleus | 40.0 | 26.09 |
| OQU76250 | Sorghum | nucleus | 31.67 | 21.84 |
| EER89161 | Sorghum | cytosol, mitochondrion, nucleus | 23.33 | 21.43 |
| EES05602 | Sorghum | nucleus | 21.67 | 19.8 |
| EES13767 | Sorghum | nucleus | 22.78 | 13.8 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.5.51.2 | ProteinID:AFO85383.1 | ProteinID:AFO85384.1 | ProteinID:AFO85385.1 | ProteinID:AFO85386.1 |
| InterPro:CBFA_NFYB_domain | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046982 |
| InterPro:Histone-fold | InterPro:IPR009072 | UniProt:J7FK00 | EnsemblPlants:KXG22176 | ProteinID:KXG22176 | ProteinID:KXG22176.1 |
| PFAM:PF00808 | PRINTS:PR00615 | ScanProsite:PS00685 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF37 | EnsemblPlantsGene:SORBI_3009G166200 |
| SUPFAM:SSF47113 | InterPro:Transcrpt_fac_NFYB/HAP3_CS | UniParc:UPI0001C805D1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr9:-:52254223..52257308
Molecular Weight (calculated)
18966.2 Da
IEP (calculated)
6.788
GRAVY (calculated)
-0.656
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MADAPASPGG GGGSHESGSP RGGGGGGGGS VREQDRFLPI ANISRIMKKA IPANGKIAKD AKETVQECVS EFISFITSEA SDKCQREKRK TINGDDLLWA
101: MATLGFEDYI EPLKVYLQKY REMEGDSKLT AKTGDGSIKK DALGHVGGSS SAAQGMGQQG AYNQGMGYMQ PQYHNGDISN
101: MATLGFEDYI EPLKVYLQKY REMEGDSKLT AKTGDGSIKK DALGHVGGSS SAAQGMGQQG AYNQGMGYMQ PQYHNGDISN
001: MAESQAKSPG GCGSHESGGD QSPRSLHVRE QDRFLPIANI SRIMKRGLPA NGKIAKDAKE IVQECVSEFI SFVTSEASDK CQREKRKTIN GDDLLWAMAT
101: LGFEDYMEPL KVYLMRYREM EGDTKGSAKG GDPNAKKDGQ SSQNGQFSQL AHQGPYGNSQ AQQHMMVPMP GTD
101: LGFEDYMEPL KVYLMRYREM EGDTKGSAKG GDPNAKKDGQ SSQNGQFSQL AHQGPYGNSQ AQQHMMVPMP GTD
Arabidopsis Description
NFYB8Nuclear transcription factor Y subunit B-8 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYK4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.