Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G347000.1 | Wheat | nucleus | 82.42 | 83.44 |
| TraesCS3B01G385600.1 | Wheat | nucleus | 82.42 | 83.44 |
| TraesCS3A01G352900.1 | Wheat | nucleus | 82.42 | 83.44 |
| Zm00001d042968_P002 | Maize | extracellular, nucleus | 92.12 | 80.0 |
| KXG22176 | Sorghum | nucleus | 83.03 | 76.11 |
| Os01t0834400-02 | Rice | nucleus | 79.39 | 73.6 |
| GSMUA_Achr11P... | Banana | nucleus | 55.76 | 70.23 |
| GSMUA_Achr5P28380_001 | Banana | nucleus | 57.58 | 68.35 |
| KRH17618 | Soybean | plastid | 38.79 | 56.64 |
| OQU78466 | Sorghum | nucleus | 44.85 | 54.01 |
| HORVU3Hr1G087390.1 | Barley | mitochondrion | 82.42 | 52.71 |
| EES04176 | Sorghum | nucleus | 44.85 | 40.66 |
| EER94693 | Sorghum | nucleus | 53.94 | 39.56 |
| EER99684 | Sorghum | nucleus | 51.52 | 38.99 |
| OQU88166 | Sorghum | cytosol, mitochondrion, nucleus | 32.73 | 36.99 |
| EES14637 | Sorghum | nucleus | 52.12 | 31.27 |
| KXG30848 | Sorghum | nucleus | 41.21 | 24.64 |
| OQU76250 | Sorghum | nucleus | 33.94 | 21.46 |
| EER89161 | Sorghum | cytosol, mitochondrion, nucleus | 24.24 | 20.41 |
| EES05602 | Sorghum | nucleus | 23.03 | 19.29 |
| EES13767 | Sorghum | nucleus | 24.85 | 13.8 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.5.51.2 | UniProt:A0A1W0W093 | InterPro:CBFA_NFYB_domain | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046982 | InterPro:Histone-fold | InterPro:IPR009072 | EnsemblPlants:OQU87808 |
| ProteinID:OQU87808 | ProteinID:OQU87808.1 | PFAM:PF00808 | PRINTS:PR00615 | ScanProsite:PS00685 | PANTHER:PTHR11064 |
| PANTHER:PTHR11064:SF37 | EnsemblPlantsGene:SORBI_3003G346500 | SUPFAM:SSF47113 | InterPro:Transcrpt_fac_NFYB/HAP3_CS | UniParc:UPI0009DC8EFE | SEG:seg |
Description
hypothetical protein
Coordinates
chr3:-:66732883..66735262
Molecular Weight (calculated)
17773.8 Da
IEP (calculated)
6.517
GRAVY (calculated)
-0.732
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MADDGGSHEG GGGGGGGGGY REQDRFLPIA NISRIMKKAV PANGKIAKDA KETLQECVSE FISFVTSEAS DKCQKEKRKT INGDDLLWAM ATLGFEEYVE
101: PLKIYLQKYR EGDSKLSTKA GEGSIKKDAI SSHGGTSSSS NQLVQHGVYN QGMGYMQPQY HNGDT
101: PLKIYLQKYR EGDSKLSTKA GEGSIKKDAI SSHGGTSSSS NQLVQHGVYN QGMGYMQPQY HNGDT
001: MAESQTGGGG GGSHESGGDQ SPRSLNVREQ DRFLPIANIS RIMKRGLPLN GKIAKDAKET MQECVSEFIS FVTSEASDKC QREKRKTING DDLLWAMATL
101: GFEDYIDPLK VYLMRYREME GDTKGSGKGG ESSAKRDGQP SQVSQFSQVP QQGSFSQGPY GNSQGSNMMV QMPGTE
101: GFEDYIDPLK VYLMRYREME GDTKGSGKGG ESSAKRDGQP SQVSQFSQVP QQGSFSQGPY GNSQGSNMMV QMPGTE
Arabidopsis Description
NFYB10Nuclear transcription factor Y subunit B-10 [Source:UniProtKB/Swiss-Prot;Acc:Q67XJ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.