Factsheet for TraesCS3A01G352900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G347000.1	Wheat	nucleus	99.39	99.39
TraesCS3B01G385600.1	Wheat	nucleus	99.39	99.39
OQU87808	Sorghum	nucleus	83.44	82.42
Os01t0834400-02	Rice	nucleus	87.12	79.78
GSMUA_Achr11P...	Banana	nucleus	56.44	70.23
Zm00001d042968_P002	Maize	extracellular, nucleus	81.6	70.0
TraesCS1A01G288500.3	Wheat	nucleus	77.3	69.23
GSMUA_Achr5P28380_001	Banana	nucleus	58.28	68.35
TraesCS7A01G486400.1	Wheat	cytosol	41.72	64.15
HORVU3Hr1G087390.1	Barley	mitochondrion	96.32	60.85
TraesCS1A01G411700.1	Wheat	nucleus	49.08	58.82
KRH17618	Soybean	plastid	39.26	56.64
TraesCS3A01G026900.1	Wheat	nucleus	53.99	43.56
TraesCS2A01G173500.1	Wheat	nucleus	52.15	37.61
TraesCS3A01G457100.1	Wheat	nucleus	43.56	37.37
TraesCS2A01G359400.1	Wheat	nucleus	50.31	32.93
TraesCS3A01G457000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	32.52	30.81
TraesCS7A01G214800.1	Wheat	cytosol	34.36	27.05
TraesCS6A01G287300.1	Wheat	nucleus	39.88	26.42
TraesCS6A01G287400.2	Wheat	cytosol, mitochondrion, nucleus, plastid	26.99	25.73
TraesCS7A01G214900.1	Wheat	nucleus	36.2	22.18
TraesCS7A01G214600.1	Wheat	nucleus	35.58	21.8
TraesCS7A01G214700.1	Wheat	nucleus	36.2	21.53
TraesCS7A01G214500.1	Wheat	nucleus	37.42	20.47
TraesCS3A01G450700.1	Wheat	cytosol, mitochondrion, nucleus	23.31	13.06

Protein Annotations

Gene3D:1.10.20.10	MapMan:15.5.51.2	InterPro:CBFA_NFYB_domain	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	GO:GO:0046982	InterPro:Histone-fold	InterPro:IPR009072	PFAM:PF00808	PRINTS:PR00615
ScanProsite:PS00685	PANTHER:PTHR11064	PANTHER:PTHR11064:SF37	SUPFAM:SSF47113	EnsemblPlantsGene:TraesCS3A01G352900	EnsemblPlants:TraesCS3A01G352900.1
InterPro:Transcrpt_fac_NFYB/HAP3_CS	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:600927435..600928921

Molecular Weight (calculated)

17731.9 Da

IEP (calculated)

6.267

GRAVY (calculated)

-0.672

Length

163 amino acids

Sequence
(BLAST)

001: MADDDSGSPR GGGGVREQDR FLPIANISRI MKKAVPANGK IAKDAKETLQ ECVSEFISFV TSEASDKCQK EKRKTINGDD LLWAMATLGF EEYVDPLKIY
101: LQKYRDMEGD SKLTSKSGEG SVKKDIIGAH SGATSSNAQA MVQHGGYAQG MGYMQPQYHN GDT

Best Arabidopsis Sequence Match ( AT3G53340.1 )
(BLAST)

001: MAESQTGGGG GGSHESGGDQ SPRSLNVREQ DRFLPIANIS RIMKRGLPLN GKIAKDAKET MQECVSEFIS FVTSEASDKC QREKRKTING DDLLWAMATL
101: GFEDYIDPLK VYLMRYREME GDTKGSGKGG ESSAKRDGQP SQVSQFSQVP QQGSFSQGPY GNSQGSNMMV QMPGTE

Arabidopsis Description

NFYB10Nuclear transcription factor Y subunit B-10 [Source:UniProtKB/Swiss-Prot;Acc:Q67XJ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.