Factsheet for TraesCS3A01G026900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G017400.1	Wheat	nucleus	93.07	88.68
KRH66225	Soybean	cytosol	44.06	82.41
KRH57816	Soybean	cytosol	31.68	82.05
HORVU7Hr1G105460.1	Barley	nucleus	66.34	77.46
KRG88870	Soybean	cytosol	40.59	75.93
Os03t0413000-01	Rice	nucleus	82.18	75.8
EER94693	Sorghum	nucleus	81.19	72.89
Zm00001d029505_P001	Maize	nucleus	79.7	72.52
HORVU7Hr1G105500.6	Barley	nucleus	66.34	72.43
TraesCS2A01G173500.1	Wheat	nucleus	70.3	62.83
TraesCS7A01G486400.1	Wheat	cytosol	30.2	57.55
TraesCS3A01G352900.1	Wheat	nucleus	43.56	53.99
TraesCS1A01G411700.1	Wheat	nucleus	36.14	53.68
TraesCS1A01G288500.3	Wheat	nucleus	46.04	51.1
TraesCS2A01G359400.1	Wheat	nucleus	50.0	40.56
TraesCS3A01G457100.1	Wheat	nucleus	38.12	40.53
TraesCS3A01G457000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	28.71	33.72
TraesCS6A01G287300.1	Wheat	nucleus	39.6	32.52
TraesCS7A01G214800.1	Wheat	cytosol	30.2	29.47
TraesCS7A01G214600.1	Wheat	nucleus	33.66	25.56
TraesCS7A01G214900.1	Wheat	nucleus	33.17	25.19
TraesCS6A01G287400.2	Wheat	cytosol, mitochondrion, nucleus, plastid	21.29	25.15
TraesCS7A01G214700.1	Wheat	nucleus	33.66	24.82
TraesCS7A01G214500.1	Wheat	nucleus	34.65	23.49
TraesCS3A01G450700.1	Wheat	cytosol, mitochondrion, nucleus	21.78	15.12

Protein Annotations

Gene3D:1.10.20.10	MapMan:15.5.51.2	InterPro:CBFA_NFYB_domain	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	GO:GO:0046982	InterPro:Histone-fold	InterPro:IPR009072	PFAM:PF00808	PRINTS:PR00615
ScanProsite:PS00685	PANTHER:PTHR11064	PANTHER:PTHR11064:SF87	SUPFAM:SSF47113	EnsemblPlantsGene:TraesCS3A01G026900	EnsemblPlants:TraesCS3A01G026900.1
InterPro:Transcrpt_fac_NFYB/HAP3_CS	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:14044134..14044742

Molecular Weight (calculated)

21794.4 Da

IEP (calculated)

5.687

GRAVY (calculated)

-0.835

Length

202 amino acids

Sequence
(BLAST)

001: MPESDNDSGG PSNTGGEGEL SSPREQDRFL PIANVSRIMK KALPANAKIS KDAKETVQEC VSEFISFITG EASDKCQREK RKTINGDDLL WAMTTLGFED
101: YVDPLKHYLH KFREIEGERA AATSTSTSTT PDMPRNNNNN ATGYADAPGG MMMMGQPMYG SPPPPQQQQQ HQHQIAMGGR AGFPYLGGGG GSSSSSGFGR
201: KE

Best Arabidopsis Sequence Match ( AT4G14540.1 )
(BLAST)

001: MADSDNDSGG HKDGGNASTR EQDRFLPIAN VSRIMKKALP ANAKISKDAK ETVQECVSEF ISFITGEASD KCQREKRKTI NGDDLLWAMT TLGFEDYVEP
101: LKVYLQKYRE VEGEKTTTAG RQGDKEGGGG GGGAGSGSGG APMYGGGMVT TMGHQFSHHF S

Arabidopsis Description

NFYB3Nuclear transcription factor Y subunit B-3 [Source:UniProtKB/Swiss-Prot;Acc:O23310]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.