Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G026900.1 | Wheat | nucleus | 88.68 | 93.07 |
| KRH66225 | Soybean | cytosol | 41.98 | 82.41 |
| KRH57816 | Soybean | cytosol | 30.19 | 82.05 |
| HORVU7Hr1G105460.1 | Barley | nucleus | 64.15 | 78.61 |
| KRG88870 | Soybean | cytosol | 38.68 | 75.93 |
| Os03t0413000-01 | Rice | nucleus | 78.3 | 75.8 |
| HORVU7Hr1G105500.6 | Barley | nucleus | 64.15 | 73.51 |
| Zm00001d029505_P001 | Maize | nucleus | 76.89 | 73.42 |
| EER94693 | Sorghum | nucleus | 77.83 | 73.33 |
| TraesCS2B01G199800.1 | Wheat | nucleus | 68.4 | 64.44 |
| TraesCS7B01G501400.1 | Wheat | cytoskeleton, cytosol, nucleus | 30.66 | 57.02 |
| TraesCS1B01G442000.1 | Wheat | nucleus | 34.91 | 54.41 |
| TraesCS3B01G385600.1 | Wheat | nucleus | 41.04 | 53.37 |
| TraesCS5B01G454900.1 | Wheat | cytoskeleton, cytosol, nucleus | 29.72 | 51.64 |
| TraesCS1B01G297900.2 | Wheat | nucleus | 43.4 | 50.55 |
| TraesCS2B01G378700.1 | Wheat | nucleus | 47.64 | 40.56 |
| TraesCS6B01G316600.1 | Wheat | nucleus | 37.74 | 32.52 |
| TraesCS3B01G452700.1 | Wheat | cytosol | 18.87 | 31.01 |
| TraesCS6B01G316700.1 | Wheat | cytosol, nucleus, plastid | 20.75 | 26.99 |
| TraesCS7B01G121900.1 | Wheat | nucleus | 33.96 | 25.71 |
| TraesCS7B01G121800.1 | Wheat | nucleus | 33.02 | 23.33 |
| TraesCS3B01G487800.1 | Wheat | cytosol, mitochondrion, nucleus | 21.23 | 15.2 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.5.51.2 | InterPro:CBFA_NFYB_domain | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | GO:GO:0046982 | InterPro:Histone-fold | InterPro:IPR009072 | PFAM:PF00808 | PRINTS:PR00615 |
| ScanProsite:PS00685 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF87 | SUPFAM:SSF47113 | EnsemblPlantsGene:TraesCS3B01G017400 | EnsemblPlants:TraesCS3B01G017400.1 |
| InterPro:Transcrpt_fac_NFYB/HAP3_CS | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:7186414..7187052
Molecular Weight (calculated)
22664.3 Da
IEP (calculated)
6.153
GRAVY (calculated)
-0.775
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MPESDNDSGG PSNTGGEGEL SSPREQDRFL PIANVSRIMK KALPANAKIS KDAKETVQEC VSEFISFITG EASDKCQREK RKTINGDDLL WAMTTLGFED
101: YVDPLKHYLH KFREIEGERA AATSTSTAPQ HLPDNNATGY ADYGGAAVPA PARGGMMMMG QPMYGSPPPQ QHQQQQHQHQ VAMGGRAGFP YHGGSSGGGG
201: SSSSSGFGWK EG
101: YVDPLKHYLH KFREIEGERA AATSTSTAPQ HLPDNNATGY ADYGGAAVPA PARGGMMMMG QPMYGSPPPQ QHQQQQHQHQ VAMGGRAGFP YHGGSSGGGG
201: SSSSSGFGWK EG
001: MADSDNDSGG HKDGGNASTR EQDRFLPIAN VSRIMKKALP ANAKISKDAK ETVQECVSEF ISFITGEASD KCQREKRKTI NGDDLLWAMT TLGFEDYVEP
101: LKVYLQKYRE VEGEKTTTAG RQGDKEGGGG GGGAGSGSGG APMYGGGMVT TMGHQFSHHF S
101: LKVYLQKYRE VEGEKTTTAG RQGDKEGGGG GGGAGSGSGG APMYGGGMVT TMGHQFSHHF S
Arabidopsis Description
NFYB3Nuclear transcription factor Y subunit B-3 [Source:UniProtKB/Swiss-Prot;Acc:O23310]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.