Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH66225 | Soybean | cytosol | 84.26 | 84.26 |
| KRH57816 | Soybean | cytosol | 56.48 | 78.21 |
| KRH73908 | Soybean | nucleus | 77.78 | 50.91 |
| KRH50875 | Soybean | nucleus | 55.56 | 49.59 |
| KRH37126 | Soybean | nucleus | 52.78 | 48.72 |
| HORVU7Hr1G105460.1 | Barley | nucleus | 76.85 | 47.98 |
| KRH02238 | Soybean | nucleus | 54.63 | 47.97 |
| KRG98494 | Soybean | nucleus | 82.41 | 47.34 |
| KRH46369 | Soybean | nucleus | 82.41 | 46.6 |
| KRH11589 | Soybean | nucleus | 73.15 | 46.2 |
| KRG95922 | Soybean | nucleus | 69.44 | 46.01 |
| KRH32395 | Soybean | nucleus | 67.59 | 45.62 |
| HORVU7Hr1G105500.6 | Barley | nucleus | 76.85 | 44.86 |
| KRH36605 | Soybean | nucleus | 73.15 | 44.63 |
| KRH67637 | Soybean | nucleus | 69.44 | 43.86 |
| KRH17618 | Soybean | plastid | 45.37 | 43.36 |
| KRH31905 | Soybean | cytosol, mitochondrion, nucleus | 57.41 | 42.76 |
| KRH71548 | Soybean | nucleus | 56.48 | 41.5 |
| KRG92229 | Soybean | nucleus | 65.74 | 41.04 |
| KRH34567 | Soybean | nucleus | 65.74 | 40.8 |
| TraesCS3A01G026900.1 | Wheat | nucleus | 75.93 | 40.59 |
| Zm00001d006813_P001 | Maize | nucleus | 75.93 | 40.0 |
| KRH12126 | Soybean | nucleus | 52.78 | 39.58 |
| TraesCS3B01G017400.1 | Wheat | nucleus | 75.93 | 38.68 |
| Zm00001d022099_P001 | Maize | nucleus | 75.0 | 38.21 |
| Os03t0413000-01 | Rice | nucleus | 75.93 | 37.44 |
| Zm00001d029505_P001 | Maize | nucleus | 76.85 | 37.39 |
| EER99684 | Sorghum | nucleus | 75.0 | 37.16 |
| EER94693 | Sorghum | nucleus | 75.93 | 36.44 |
| HORVU2Hr1G032320.1 | Barley | nucleus | 75.0 | 36.16 |
| TraesCS2D01G180700.1 | Wheat | nucleus | 75.0 | 36.0 |
| TraesCS2B01G199800.1 | Wheat | nucleus | 75.0 | 36.0 |
| TraesCS2A01G173500.1 | Wheat | nucleus | 75.0 | 35.84 |
| Os07t0606600-01 | Rice | nucleus | 74.07 | 35.71 |
| KRH33913 | Soybean | nucleus | 46.3 | 35.46 |
| KRG92877 | Soybean | nucleus | 44.44 | 34.78 |
| KRH59435 | Soybean | nucleus | 67.59 | 32.44 |
| KRH59594 | Soybean | nucleus | 62.04 | 32.37 |
| KRG89094 | Soybean | cytosol | 48.15 | 30.95 |
| KRH43304 | Soybean | nucleus | 67.59 | 30.93 |
| KRH40945 | Soybean | nucleus | 62.04 | 30.32 |
| KRH66068 | Soybean | nucleus | 48.15 | 29.89 |
| KRH51197 | Soybean | nucleus | 52.78 | 25.56 |
| KRH01950 | Soybean | nucleus | 52.78 | 25.22 |
| KRH54787 | Soybean | cytosol, mitochondrion, nucleus | 24.07 | 16.67 |
| KRH56716 | Soybean | cytosol, mitochondrion, nucleus | 24.07 | 16.56 |
| KRH03842 | Soybean | cytosol, mitochondrion, nucleus | 24.07 | 16.25 |
| KRH70381 | Soybean | cytosol | 33.33 | 15.93 |
| KRH49798 | Soybean | cytosol, golgi, nucleus | 33.33 | 15.58 |
| KRH62965 | Soybean | cytosol, nucleus | 12.04 | 12.15 |
Protein Annotations
| EnsemblPlants:KRG88870 | EnsemblPlantsGene:GLYMA_U009700 | EntrezGene:102670152 | Gene3D:1.10.20.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046982 | InterPro:CBFA_NFYB_domain | InterPro:Histone-fold | InterPro:IPR009072 | PANTHER:PTHR11064 |
| PANTHER:PTHR11064:SF87 | PFAM:PF00808 | PRINTS:PR00615 | ProteinID:KRG88870 | ProteinID:KRG88870.1 | SUPFAM:SSF47113 |
| UniParc:UPI00023CBC19 | UniProt:I1LKL8 | MapMan:15.5.51.2 | : | : | : |
Description
hypothetical protein
Coordinates
chrscaffold_21:+:125326..125652
Molecular Weight (calculated)
12185.6 Da
IEP (calculated)
9.023
GRAVY (calculated)
-0.534
Length
108 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSDNDSDG AHNSGKGVKL LSREQDRFLP IANVSRIMKK TLPANVKISK YTKETVQEYV SALISFIIDK ASNKCQREKR KTINGDDLLW AMTTLGFEDY
101: LEPLKGYL
101: LEPLKGYL
001: MADSDNDSGG HKDGGNASTR EQDRFLPIAN VSRIMKKALP ANAKISKDAK ETVQECVSEF ISFITGEASD KCQREKRKTI NGDDLLWAMT TLGFEDYVEP
101: LKVYLQKYRE VEGEKTTTAG RQGDKEGGGG GGGAGSGSGG APMYGGGMVT TMGHQFSHHF S
101: LKVYLQKYRE VEGEKTTTAG RQGDKEGGGG GGGAGSGSGG APMYGGGMVT TMGHQFSHHF S
Arabidopsis Description
NFYB3Nuclear transcription factor Y subunit B-3 [Source:UniProtKB/Swiss-Prot;Acc:O23310]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.