Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH51197 | Soybean | nucleus | 92.92 | 94.17 |
| PGSC0003DMT400034611 | Potato | mitochondrion | 37.61 | 70.83 |
| VIT_00s0956g00020.t01 | Wine grape | nucleus | 65.04 | 69.67 |
| Solyc11g012750.1.1 | Tomato | nucleus | 42.92 | 63.82 |
| KRH57816 | Soybean | cytosol | 20.35 | 58.97 |
| KRH50875 | Soybean | nucleus | 30.09 | 56.2 |
| CDY25952 | Canola | nucleus | 50.88 | 55.56 |
| CDY41063 | Canola | nucleus | 50.88 | 55.02 |
| KRH66225 | Soybean | cytosol | 26.11 | 54.63 |
| KRH02238 | Soybean | nucleus | 29.65 | 54.47 |
| Bra017471.1-P | Field mustard | nucleus | 49.56 | 53.59 |
| KRG89094 | Soybean | cytosol | 39.82 | 53.57 |
| KRH66068 | Soybean | nucleus | 41.15 | 53.45 |
| KRG88870 | Soybean | cytosol | 25.22 | 52.78 |
| PGSC0003DMT400035193 | Potato | cytosol, extracellular, nucleus | 15.04 | 51.52 |
| Solyc04g015060.1.1 | Tomato | nucleus | 53.98 | 51.48 |
| GSMUA_Achr3P04310_001 | Banana | nucleus | 48.23 | 51.42 |
| AT5G47670.3 | Thale cress | nucleus | 53.1 | 51.28 |
| PGSC0003DMT400079574 | Potato | cytosol | 30.53 | 51.11 |
| Bra024924.1-P | Field mustard | nucleus | 52.21 | 51.08 |
| CDY17715 | Canola | nucleus | 52.21 | 51.08 |
| PGSC0003DMT400035117 | Potato | nucleus | 40.27 | 50.84 |
| KRH37126 | Soybean | nucleus | 24.78 | 47.86 |
| KRH32395 | Soybean | nucleus | 32.74 | 46.25 |
| KRH73908 | Soybean | nucleus | 33.63 | 46.06 |
| KRG95922 | Soybean | nucleus | 33.19 | 46.01 |
| KRH71548 | Soybean | nucleus | 29.65 | 45.58 |
| KRH31905 | Soybean | cytosol, mitochondrion, nucleus | 29.2 | 45.52 |
| KRH12126 | Soybean | nucleus | 28.76 | 45.14 |
| KRH67637 | Soybean | nucleus | 33.19 | 43.86 |
| KRH11589 | Soybean | nucleus | 32.74 | 43.27 |
| KRH34567 | Soybean | nucleus | 32.74 | 42.53 |
| KRH17618 | Soybean | plastid | 21.24 | 42.48 |
| PGSC0003DMT400035125 | Potato | cytosol | 35.4 | 42.33 |
| KRG92229 | Soybean | nucleus | 32.3 | 42.2 |
| Solyc05g005440.1.1 | Tomato | cytosol | 38.5 | 41.83 |
| KRH36605 | Soybean | nucleus | 32.3 | 41.24 |
| PGSC0003DMT400035129 | Potato | nucleus | 40.27 | 40.62 |
| KRG98494 | Soybean | nucleus | 33.19 | 39.89 |
| KRH46369 | Soybean | nucleus | 33.63 | 39.79 |
| PGSC0003DMT400084724 | Potato | endoplasmic reticulum, extracellular | 34.51 | 39.39 |
| KRG92877 | Soybean | nucleus | 23.89 | 39.13 |
| PGSC0003DMT400035119 | Potato | nucleus | 27.88 | 39.13 |
| KRH33913 | Soybean | nucleus | 24.34 | 39.01 |
| Solyc05g005350.1.1 | Tomato | nucleus | 34.51 | 35.62 |
| Solyc05g015550.1.1 | Tomato | mitochondrion | 34.07 | 35.16 |
| KRH59594 | Soybean | nucleus | 31.86 | 34.78 |
| Solyc05g005360.1.1 | Tomato | nucleus | 34.07 | 34.38 |
| Solyc05g005370.1.1 | Tomato | nucleus | 33.19 | 33.48 |
| PGSC0003DMT400035028 | Potato | nucleus | 18.14 | 33.33 |
| PGSC0003DMT400035121 | Potato | nucleus | 21.68 | 31.82 |
| KRH40945 | Soybean | nucleus | 30.97 | 31.67 |
| KRH59435 | Soybean | nucleus | 30.09 | 30.22 |
| KRH43304 | Soybean | nucleus | 30.53 | 29.24 |
| Solyc05g005380.1.1 | Tomato | plastid | 45.13 | 28.57 |
| KRH70381 | Soybean | cytosol | 25.22 | 25.22 |
| KRH54787 | Soybean | cytosol, mitochondrion, nucleus | 16.37 | 23.72 |
| KRH03842 | Soybean | cytosol, mitochondrion, nucleus | 16.37 | 23.12 |
| KRH56716 | Soybean | cytosol, mitochondrion, nucleus | 15.93 | 22.93 |
| Solyc05g005340.2.1 | Tomato | extracellular | 12.39 | 22.58 |
| KRH49798 | Soybean | cytosol, golgi, nucleus | 22.57 | 22.08 |
| KRH62965 | Soybean | cytosol, nucleus | 9.73 | 20.56 |
| Solyc02g032180.1.1 | Tomato | nucleus | 23.89 | 18.82 |
Protein Annotations
| Gene3D:1.10.20.10 | EntrezGene:100800011 | MapMan:15.5.51.2 | EMBL:ACUP02010293 | UniProt:B5KMS9 | InterPro:CBFA_NFYB_domain |
| EMBL:EU088289 | EnsemblPlantsGene:GLYMA_17G005600 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| GO:GO:0046982 | InterPro:Histone-fold | InterPro:IPR009072 | EnsemblPlants:KRH01950 | ProteinID:KRH01950 | ProteinID:KRH01950.1 |
| PFAM:PF00808 | PRINTS:PR00615 | ScanProsite:PS00685 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF20 | SUPFAM:SSF47113 |
| InterPro:Transcrpt_fac_NFYB/HAP3_CS | UniParc:UPI00017F92B0 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr17:-:528335..530715
Molecular Weight (calculated)
25583.2 Da
IEP (calculated)
7.171
GRAVY (calculated)
-0.710
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: METGGFHGYR KLPNTTAGLK LSVSDMNMRQ QVASSDHSAA TGEENECTVR EQDRFMPIAN VIRIMRKILP PHAKISDDAK ETIQECVSEY ISFITGEANE
101: RCQREQRKTI TAEDVLWAMS KLGFDDYIEP LTMYLHRYRE LEGDRTSMRG EPLGKRTVEY ATLGVATAFV PPPYHHHNGY FGAAMPMGTY VREAPPNTAS
201: SHHHHHHHHH HARGISNAHE PNARSI
101: RCQREQRKTI TAEDVLWAMS KLGFDDYIEP LTMYLHRYRE LEGDRTSMRG EPLGKRTVEY ATLGVATAFV PPPYHHHNGY FGAAMPMGTY VREAPPNTAS
201: SHHHHHHHHH HARGISNAHE PNARSI
001: MERGGFHGYR KLSVNNTTPS PPGLAANFLM AEGSMRPPEF NQPNKTSNGG EEECTVREQD RFMPIANVIR IMRRILPAHA KISDDSKETI QECVSEYISF
101: ITGEANERCQ REQRKTITAE DVLWAMSKLG FDDYIEPLTL YLHRYRELEG ERGVSCSAGS VSMTNGLVVK RPNGTMTEYG AYGPVPGIHM AQYHYRHQNG
201: FVFSGNEPNS KMSGSSSGAS GARVEVFPTQ QHKY
101: ITGEANERCQ REQRKTITAE DVLWAMSKLG FDDYIEPLTL YLHRYRELEG ERGVSCSAGS VSMTNGLVVK RPNGTMTEYG AYGPVPGIHM AQYHYRHQNG
201: FVFSGNEPNS KMSGSSSGAS GARVEVFPTQ QHKY
Arabidopsis Description
NFYB6Nuclear transcription factor Y subunit B-6 [Source:UniProtKB/Swiss-Prot;Acc:Q84W66]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.