Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 4
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400084724 | Potato | endoplasmic reticulum, extracellular | 67.58 | 74.75 |
| Solyc04g009520.2.1 | Tomato | nucleus | 19.18 | 48.84 |
| Solyc11g012750.1.1 | Tomato | nucleus | 31.05 | 44.74 |
| Solyc01g067130.2.1 | Tomato | plastid | 25.11 | 39.86 |
| Solyc09g074760.1.1 | Tomato | nucleus | 24.2 | 38.41 |
| Solyc02g032190.1.1 | Tomato | cytosol, nucleus, plastid | 15.98 | 36.84 |
| CDY25952 | Canola | nucleus | 34.25 | 36.23 |
| CDY41063 | Canola | nucleus | 34.25 | 35.89 |
| Solyc09g007290.2.1 | Tomato | nucleus | 21.0 | 35.66 |
| Solyc05g005440.1.1 | Tomato | cytosol | 33.79 | 35.58 |
| Bra017471.1-P | Field mustard | nucleus | 33.33 | 34.93 |
| VIT_00s0956g00020.t01 | Wine grape | nucleus | 33.33 | 34.6 |
| KRH51197 | Soybean | nucleus | 34.7 | 34.08 |
| KRH01950 | Soybean | nucleus | 35.16 | 34.07 |
| Solyc05g005390.1.1 | Tomato | nucleus, plastid | 36.99 | 34.03 |
| Solyc04g049910.2.1 | Tomato | nucleus | 25.57 | 33.94 |
| AT5G47670.3 | Thale cress | nucleus | 35.62 | 33.33 |
| Solyc04g015060.1.1 | Tomato | nucleus | 36.07 | 33.33 |
| GSMUA_Achr3P04310_001 | Banana | nucleus | 31.96 | 33.02 |
| Solyc10g009440.2.1 | Tomato | plastid | 35.62 | 32.77 |
| Solyc05g005360.1.1 | Tomato | nucleus | 33.33 | 32.59 |
| Solyc05g005350.1.1 | Tomato | nucleus | 32.42 | 32.42 |
| Solyc05g005340.2.1 | Tomato | extracellular | 18.26 | 32.26 |
| Bra024924.1-P | Field mustard | nucleus | 33.79 | 32.03 |
| CDY17715 | Canola | nucleus | 33.79 | 32.03 |
| Solyc01g099320.2.1 | Tomato | nucleus | 21.0 | 31.51 |
| Solyc05g005370.1.1 | Tomato | nucleus | 31.96 | 31.25 |
| Solyc06g009010.1.1 | Tomato | nucleus | 24.66 | 30.34 |
| Solyc07g065500.1.1 | Tomato | nucleus | 24.66 | 29.67 |
| Solyc04g054150.1.1 | Tomato | nucleus | 24.66 | 28.72 |
| Solyc12g006120.1.1 | Tomato | nucleus | 26.03 | 28.22 |
| Solyc12g027650.1.1 | Tomato | nucleus | 24.2 | 25.48 |
| Solyc07g065580.1.1 | Tomato | nucleus | 19.63 | 24.16 |
| Solyc07g065570.1.1 | Tomato | nucleus | 19.63 | 22.87 |
| Solyc05g005380.1.1 | Tomato | plastid | 36.07 | 22.13 |
| Solyc06g069310.2.1 | Tomato | cytosol, mitochondrion, nucleus | 12.79 | 21.37 |
| Solyc03g114400.2.1 | Tomato | cytosol, nucleus, plastid | 11.42 | 18.94 |
| Solyc02g032180.1.1 | Tomato | nucleus | 24.66 | 18.82 |
| Solyc12g038390.1.1 | Tomato | cytosol | 5.02 | 13.41 |
Protein Annotations
| EnsemblPlants:Solyc05g015550.1.1 | EnsemblPlantsGene:Solyc05g015550.1 | Gene3D:1.10.20.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046982 | InterPro:CBFA_NFYB_domain |
| InterPro:Histone-fold | InterPro:IPR009072 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF20 | PFAM:PF00808 | PRINTS:PR00615 |
| SEG:seg | SUPFAM:SSF47113 | UniParc:UPI0002766A92 | UniProt:K4BYS1 | MapMan:15.5.51.2 | : |
Description
No Description!
Coordinates
chr5:+:11410342..11411388
Molecular Weight (calculated)
24499.5 Da
IEP (calculated)
5.340
GRAVY (calculated)
-0.338
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPVGGVVSV TIKFCRLLIR GTERGLRQAI LLHPTNPSNL EDFICPFPEA DRFMPIENVV RIMRNILPPH AMISDESKVA VQECISEFIG FVTDQANDDC
101: QHEQRNTIMA EDLLSALKKI GFDDYIEPLT LYLHRYREVD GGADRSLKRE SLLLKRPMVC PASGYSITPN HLPPNLDMNH PPPMGDDFMK EDASNTSTSR
201: CTVSTVDNEV NSLAKGGKE
101: QHEQRNTIMA EDLLSALKKI GFDDYIEPLT LYLHRYREVD GGADRSLKRE SLLLKRPMVC PASGYSITPN HLPPNLDMNH PPPMGDDFMK EDASNTSTSR
201: CTVSTVDNEV NSLAKGGKE
001: MAEGSMRPPE FNQPNKTSNG GEEECTVREQ DRFMPIANVI RIMRRILPAH AKISDDSKET IQECVSEYIS FITGEANERC QREQRKTITA EDVLWAMSKL
101: GFDDYIEPLT LYLHRYRELE GERGVSCSAG SVSMTNGLVV KRPNGTMTEY GAYGPVPGIH MAQYHYRHQN GFVFSGNEPN SKMSGSSSGA SGARVEVFPT
201: QQHKY
101: GFDDYIEPLT LYLHRYRELE GERGVSCSAG SVSMTNGLVV KRPNGTMTEY GAYGPVPGIH MAQYHYRHQN GFVFSGNEPN SKMSGSSSGA SGARVEVFPT
201: QQHKY
Arabidopsis Description
NFYB6Nuclear transcription factor Y subunit B-6 [Source:UniProtKB/Swiss-Prot;Acc:Q84W66]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.