Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400057066 | Potato | nucleus | 96.7 | 95.14 |
| Solyc04g009520.2.1 | Tomato | nucleus | 33.52 | 70.93 |
| KRH73908 | Soybean | nucleus | 62.64 | 69.09 |
| Solyc12g006120.1.1 | Tomato | nucleus | 67.58 | 60.89 |
| VIT_19s0015g00440.t01 | Wine grape | nucleus | 67.03 | 58.1 |
| Solyc09g007290.2.1 | Tomato | nucleus | 40.66 | 57.36 |
| Solyc04g049910.2.1 | Tomato | nucleus | 48.35 | 53.33 |
| GSMUA_AchrUn_... | Banana | nucleus | 58.24 | 52.74 |
| Solyc01g067130.2.1 | Tomato | plastid | 39.56 | 52.17 |
| GSMUA_Achr6P35500_001 | Banana | nucleus | 40.11 | 51.41 |
| Solyc09g074760.1.1 | Tomato | nucleus | 38.46 | 50.72 |
| GSMUA_Achr8P05300_001 | Banana | nucleus | 41.76 | 49.67 |
| GSMUA_Achr9P09260_001 | Banana | nucleus | 47.25 | 49.14 |
| Solyc04g054150.1.1 | Tomato | nucleus | 46.15 | 44.68 |
| Solyc06g009010.1.1 | Tomato | nucleus | 40.11 | 41.01 |
| Solyc11g012750.1.1 | Tomato | nucleus | 34.07 | 40.79 |
| Solyc01g099320.2.1 | Tomato | nucleus | 32.42 | 40.41 |
| Solyc12g027650.1.1 | Tomato | nucleus | 43.41 | 37.98 |
| Solyc02g032190.1.1 | Tomato | cytosol, nucleus, plastid | 19.78 | 37.89 |
| Solyc04g015060.1.1 | Tomato | nucleus | 41.21 | 31.65 |
| Solyc05g005390.1.1 | Tomato | nucleus, plastid | 40.11 | 30.67 |
| Solyc10g009440.2.1 | Tomato | plastid | 39.01 | 29.83 |
| Solyc05g005440.1.1 | Tomato | cytosol | 31.32 | 27.4 |
| Solyc07g065580.1.1 | Tomato | nucleus | 24.18 | 24.72 |
| Solyc05g015550.1.1 | Tomato | mitochondrion | 29.67 | 24.66 |
| Solyc07g065570.1.1 | Tomato | nucleus | 25.27 | 24.47 |
| Solyc05g005350.1.1 | Tomato | nucleus | 27.47 | 22.83 |
| Solyc05g005360.1.1 | Tomato | nucleus | 27.47 | 22.32 |
| Solyc05g005370.1.1 | Tomato | nucleus | 26.92 | 21.88 |
| Solyc06g069310.2.1 | Tomato | cytosol, mitochondrion, nucleus | 14.84 | 20.61 |
| Solyc03g114400.2.1 | Tomato | cytosol, nucleus, plastid | 14.29 | 19.7 |
| Solyc05g005380.1.1 | Tomato | plastid | 38.46 | 19.61 |
| Solyc05g005340.2.1 | Tomato | extracellular | 8.79 | 12.9 |
| Solyc12g038390.1.1 | Tomato | cytosol | 5.49 | 12.2 |
| Solyc02g032180.1.1 | Tomato | nucleus | 15.93 | 10.1 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.5.51.2 | InterPro:CBFA_NFYB_domain | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | GO:GO:0046982 | InterPro:Histone-fold | InterPro:IPR009072 | UniProt:K4CHM8 | PFAM:PF00808 |
| PRINTS:PR00615 | ScanProsite:PS00685 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF9 | SUPFAM:SSF47113 | EnsemblPlantsGene:Solyc07g065500.1 |
| EnsemblPlants:Solyc07g065500.1.1 | InterPro:Transcrpt_fac_NFYB/HAP3_CS | UniParc:UPI000276AC5A | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7:-:67230320..67230868
Molecular Weight (calculated)
20156.5 Da
IEP (calculated)
6.306
GRAVY (calculated)
-0.771
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSDNESGG HRDNSNIESS LREQDRFLPI ANVSRIMKKA LPANAKISKD AKEVVQECVS EFISFITGEA SDKCQREKRK TINGDDLLWA MTTLGFEEYI
101: EPLKIYLQRF RDLEGQKSGV SGEKDHSGSV GYVEDYHGMM MMGSQHHQGH GYGTGVYNHH TGENAAGVGT GGSRFPDVGR QR
101: EPLKIYLQRF RDLEGQKSGV SGEKDHSGSV GYVEDYHGMM MMGSQHHQGH GYGTGVYNHH TGENAAGVGT GGSRFPDVGR QR
001: MADSDNDSGG HKDGGNASTR EQDRFLPIAN VSRIMKKALP ANAKISKDAK ETVQECVSEF ISFITGEASD KCQREKRKTI NGDDLLWAMT TLGFEDYVEP
101: LKVYLQKYRE VEGEKTTTAG RQGDKEGGGG GGGAGSGSGG APMYGGGMVT TMGHQFSHHF S
101: LKVYLQKYRE VEGEKTTTAG RQGDKEGGGG GGGAGSGSGG APMYGGGMVT TMGHQFSHHF S
Arabidopsis Description
NFYB3Nuclear transcription factor Y subunit B-3 [Source:UniProtKB/Swiss-Prot;Acc:O23310]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.