CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66225	Soybean	cytosol	54.55	83.33
KRH57816	Soybean	cytosol	38.79	82.05
KRG88870	Soybean	cytosol	50.91	77.78
KRG98494	Soybean	nucleus	84.24	73.94
KRH46369	Soybean	nucleus	83.64	72.25
KRH11589	Soybean	nucleus	67.88	65.5
KRH36605	Soybean	nucleus	67.88	63.28
Solyc07g065500.1.1	Tomato	nucleus	69.09	62.64
PGSC0003DMT400057066	Potato	nucleus	69.09	61.62
KRH50875	Soybean	nucleus	42.42	57.85
KRG95922	Soybean	nucleus	56.36	57.06
KRH02238	Soybean	nucleus	41.82	56.1
KRH17618	Soybean	plastid	38.18	55.75
KRH32395	Soybean	nucleus	53.94	55.62
KRH37126	Soybean	nucleus	39.39	55.56
KRH67637	Soybean	nucleus	56.97	54.97
KRH31905	Soybean	cytosol, mitochondrion, nucleus	46.06	52.41
KRH71548	Soybean	nucleus	45.45	51.02
KRG92229	Soybean	nucleus	51.52	49.13
KRH34567	Soybean	nucleus	51.52	48.85
KRH12126	Soybean	nucleus	41.82	47.92
KRH33913	Soybean	nucleus	38.18	44.68
KRG92877	Soybean	nucleus	36.36	43.48
KRH59435	Soybean	nucleus	58.79	43.11
KRH59594	Soybean	nucleus	52.73	42.03
KRH40945	Soybean	nucleus	55.15	41.18
KRH43304	Soybean	nucleus	58.79	41.1
KRG89094	Soybean	cytosol	41.21	40.48
KRH66068	Soybean	nucleus	40.0	37.93
KRH51197	Soybean	nucleus	46.06	34.08
KRH01950	Soybean	nucleus	46.06	33.63
KRH56716	Soybean	cytosol, mitochondrion, nucleus	23.64	24.84
KRH54787	Soybean	cytosol, mitochondrion, nucleus	23.03	24.36
KRH03842	Soybean	cytosol, mitochondrion, nucleus	23.03	23.75
KRH70381	Soybean	cytosol	28.48	20.8
KRH62965	Soybean	cytosol, nucleus	13.33	20.56
KRH49798	Soybean	cytosol, golgi, nucleus	25.45	18.18

Protein Annotations

Gene3D:1.10.20.10	MapMan:15.5.51.2	UniProt:A0A0R4J2T6	EMBL:ACUP02001290	InterPro:CBFA_NFYB_domain	EnsemblPlantsGene:GLYMA_02G300200
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	GO:GO:0046982	InterPro:Histone-fold
InterPro:IPR009072	EnsemblPlants:KRH73908	ProteinID:KRH73908	ProteinID:KRH73908.1	PFAM:PF00808	PRINTS:PR00615
ScanProsite:PS00685	PANTHER:PTHR11064	PANTHER:PTHR11064:SF87	SUPFAM:SSF47113	InterPro:Transcrpt_fac_NFYB/HAP3_CS	UniParc:UPI0000052373
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:47673784..47674892

Molecular Weight (calculated)

18196.2 Da

IEP (calculated)

6.519

GRAVY (calculated)

-0.774

Length

165 amino acids

Sequence
(BLAST)

001: MAESDNDSGG AQNAGNSGNL SELSPREQDR FLPIANVSRI MKKALPANAK ISKDAKETVQ ECVSEFISFI TGEASDKCQR EKRKTINGDD LLWAMTTLGF
101: EEYVEPLKIY LQRFREMEGE KTVAARDSSK DSASASSYHQ GHVYGSPAYH HQVPGPTYPA PGRPR

Best Arabidopsis Sequence Match ( AT4G14540.1 )
(BLAST)

001: MADSDNDSGG HKDGGNASTR EQDRFLPIAN VSRIMKKALP ANAKISKDAK ETVQECVSEF ISFITGEASD KCQREKRKTI NGDDLLWAMT TLGFEDYVEP
101: LKVYLQKYRE VEGEKTTTAG RQGDKEGGGG GGGAGSGSGG APMYGGGMVT TMGHQFSHHF S

Arabidopsis Description

NFYB3Nuclear transcription factor Y subunit B-3 [Source:UniProtKB/Swiss-Prot;Acc:O23310]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.