Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH34567 | Soybean | nucleus | 96.53 | 95.98 |
| Solyc04g009520.2.1 | Tomato | nucleus | 38.15 | 76.74 |
| VIT_13s0019g03600.t01 | Wine grape | nucleus | 75.72 | 74.43 |
| KRH57816 | Soybean | cytosol | 33.53 | 74.36 |
| CDX74880 | Canola | nucleus | 60.69 | 73.94 |
| Bra005074.1-P | Field mustard | nucleus | 60.12 | 73.24 |
| KRH32395 | Soybean | nucleus | 67.63 | 73.12 |
| KRH67637 | Soybean | nucleus | 71.68 | 72.51 |
| KRG95922 | Soybean | nucleus | 68.21 | 72.39 |
| PGSC0003DMT400082465 | Potato | nucleus | 53.76 | 70.45 |
| KRH66225 | Soybean | cytosol | 42.77 | 68.52 |
| Solyc04g049910.2.1 | Tomato | nucleus | 63.01 | 66.06 |
| KRG88870 | Soybean | cytosol | 41.04 | 65.74 |
| AT2G38880.8 | Thale cress | nucleus | 61.27 | 64.63 |
| KRH50875 | Soybean | nucleus | 44.51 | 63.64 |
| CDY07691 | Canola | nucleus | 57.8 | 60.24 |
| KRH02238 | Soybean | nucleus | 42.77 | 60.16 |
| GSMUA_Achr8P17450_001 | Banana | nucleus | 66.47 | 59.28 |
| KRH17618 | Soybean | plastid | 36.99 | 56.64 |
| KRH37126 | Soybean | nucleus | 38.15 | 56.41 |
| CDY14422 | Canola | nucleus | 53.18 | 56.1 |
| KRH11589 | Soybean | nucleus | 53.18 | 53.8 |
| KRH31905 | Soybean | cytosol, mitochondrion, nucleus | 43.93 | 52.41 |
| KRH71548 | Soybean | nucleus | 43.93 | 51.7 |
| KRH73908 | Soybean | nucleus | 49.13 | 51.52 |
| CDX91501 | Canola | nucleus | 63.01 | 51.42 |
| KRH36605 | Soybean | nucleus | 52.6 | 51.41 |
| KRH12126 | Soybean | nucleus | 42.2 | 50.69 |
| KRG98494 | Soybean | nucleus | 51.45 | 47.34 |
| KRH46369 | Soybean | nucleus | 51.45 | 46.6 |
| KRH33913 | Soybean | nucleus | 35.26 | 43.26 |
| KRG92877 | Soybean | nucleus | 34.1 | 42.75 |
| KRH59594 | Soybean | nucleus | 47.4 | 39.61 |
| KRH59435 | Soybean | nucleus | 49.71 | 38.22 |
| KRH40945 | Soybean | nucleus | 46.82 | 36.65 |
| KRH43304 | Soybean | nucleus | 49.71 | 36.44 |
| KRG89094 | Soybean | cytosol | 35.26 | 36.31 |
| KRH66068 | Soybean | nucleus | 35.26 | 35.06 |
| KRH01950 | Soybean | nucleus | 42.2 | 32.3 |
| KRH51197 | Soybean | nucleus | 41.62 | 32.29 |
| KRH54787 | Soybean | cytosol, mitochondrion, nucleus | 24.28 | 26.92 |
| KRH03842 | Soybean | cytosol, mitochondrion, nucleus | 23.12 | 25.0 |
| KRH56716 | Soybean | cytosol, mitochondrion, nucleus | 22.54 | 24.84 |
| KRH62965 | Soybean | cytosol, nucleus | 13.29 | 21.5 |
| KRH70381 | Soybean | cytosol | 27.17 | 20.8 |
| KRH49798 | Soybean | cytosol, golgi, nucleus | 24.86 | 18.61 |
Protein Annotations
| Gene3D:1.10.20.10 | EntrezGene:100779577 | MapMan:15.5.51.2 | UniProt:A0A0R4J671 | EMBL:ACUP02012736 | InterPro:CBFA_NFYB_domain |
| EnsemblPlantsGene:GLYMA_20G198500 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046982 |
| InterPro:Histone-fold | InterPro:IPR009072 | EnsemblPlants:KRG92229 | ProteinID:KRG92229 | ProteinID:KRG92229.1 | ProteinID:KRG92230.1 |
| ProteinID:KRG92231.1 | PFAM:PF00808 | PRINTS:PR00615 | ScanProsite:PS00685 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF85 |
| SUPFAM:SSF47113 | InterPro:Transcrpt_fac_NFYB/HAP3_CS | UniParc:UPI0000598609 | : | : | : |
Description
hypothetical protein
Coordinates
chr20:-:43603567..43607751
Molecular Weight (calculated)
18854.1 Da
IEP (calculated)
5.668
GRAVY (calculated)
-0.702
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDAPPSPTH ESGGEQSPRG SSSGAREQDR YLPIANISRI MKKALPPNGK IAKDAKDTMQ ECVSEFISFI TSEASEKCQK EKRKTINGDD LLWAMATLGF
101: EDYIEPLKVY LARYREAEGD TKGSARSGDG SATPDQVGLA GQNSQLVHQG SLNYIGLQVQ PQHLVMPSMQ SHE
101: EDYIEPLKVY LARYREAEGD TKGSARSGDG SATPDQVGLA GQNSQLVHQG SLNYIGLQVQ PQHLVMPSMQ SHE
001: MADTPSSPAG DGGESGGSVR EQDRYLPIAN ISRIMKKALP PNGKIGKDAK DTVQECVSEF ISFITSEASD KCQKEKRKTV NGDDLLWAMA TLGFEDYLEP
101: LKIYLARYRE LEGDNKGSGK SGDGSNRDAG GGVSGEEMPV
101: LKIYLARYRE LEGDNKGSGK SGDGSNRDAG GGVSGEEMPV
Arabidopsis Description
NF-YB1Nuclear factor Y, subunit B1 [Source:UniProtKB/TrEMBL;Acc:F4ITZ0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.