CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95922	Soybean	nucleus	87.13	91.41
VIT_06s0004g03490.t01	Wine grape	nucleus	68.42	87.97
KRH32395	Soybean	nucleus	78.36	83.75
KRH57816	Soybean	cytosol	34.5	75.64
KRH66225	Soybean	cytosol	46.78	74.07
KRH34567	Soybean	nucleus	74.85	73.56
KRG92229	Soybean	nucleus	72.51	71.68
KRG88870	Soybean	cytosol	43.86	69.44
GSMUA_Achr8P17450_001	Banana	nucleus	73.1	64.43
KRH17618	Soybean	plastid	40.35	61.06
KRH50875	Soybean	nucleus	42.11	59.5
KRH02238	Soybean	nucleus	41.52	57.72
KRH73908	Soybean	nucleus	54.97	56.97
KRH37126	Soybean	nucleus	38.01	55.56
KRH36605	Soybean	nucleus	57.31	55.37
KRH11589	Soybean	nucleus	54.97	54.97
KRG98494	Soybean	nucleus	56.14	51.06
KRH31905	Soybean	cytosol, mitochondrion, nucleus	42.69	50.34
KRH71548	Soybean	nucleus	43.27	50.34
KRH46369	Soybean	nucleus	56.14	50.26
KRH12126	Soybean	nucleus	41.52	49.31
KRH33913	Soybean	nucleus	33.33	40.43
KRG92877	Soybean	nucleus	32.16	39.86
KRH59594	Soybean	nucleus	47.95	39.61
KRH59435	Soybean	nucleus	52.05	39.56
KRG89094	Soybean	cytosol	38.6	39.29
KRH43304	Soybean	nucleus	52.05	37.71
KRH40945	Soybean	nucleus	48.54	37.56
KRH66068	Soybean	nucleus	38.01	37.36
KRH51197	Soybean	nucleus	43.86	33.63
KRH01950	Soybean	nucleus	43.86	33.19
KRH54787	Soybean	cytosol, mitochondrion, nucleus	21.64	23.72
KRH56716	Soybean	cytosol, mitochondrion, nucleus	21.64	23.57
KRH03842	Soybean	cytosol, mitochondrion, nucleus	21.64	23.12
KRH70381	Soybean	cytosol	26.32	19.91
KRH49798	Soybean	cytosol, golgi, nucleus	24.56	18.18
KRH62965	Soybean	cytosol, nucleus	11.11	17.76

Protein Annotations

Gene3D:1.10.20.10	EntrezGene:100820170	MapMan:15.5.51.2	UniProt:A0A0R0KT72	EMBL:ACUP02002069	InterPro:CBFA_NFYB_domain
EnsemblPlantsGene:GLYMA_03G177700	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	GO:GO:0046982
InterPro:Histone-fold	InterPro:IPR009072	EnsemblPlants:KRH67637	ProteinID:KRH67637	ProteinID:KRH67637.1	PFAM:PF00808
PRINTS:PR00615	ScanProsite:PS00685	PANTHER:PTHR11064	PANTHER:PTHR11064:SF85	SUPFAM:SSF47113	InterPro:Transcrpt_fac_NFYB/HAP3_CS
UniParc:UPI00019AA828	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:39046425..39050811

Molecular Weight (calculated)

18752.0 Da

IEP (calculated)

6.518

GRAVY (calculated)

-0.827

Length

171 amino acids

Sequence
(BLAST)

001: MADGPASPGG GSHESGDHSP RSNVREQDRY LPIANISRIM KKALPANGKI AKDAKETVQE CVSEFISFIT SEASDKCQRE KRKTINGDDL LWAMATLGFE
101: DYMDPLKIYL TRYREMEGDT KGSAKGGDSS AKRDVQPSPN AQLAHQGSFS QNVTYPNSQG QHMMVPMQGP E

Best Arabidopsis Sequence Match ( AT3G53340.1 )
(BLAST)

001: MAESQTGGGG GGSHESGGDQ SPRSLNVREQ DRFLPIANIS RIMKRGLPLN GKIAKDAKET MQECVSEFIS FVTSEASDKC QREKRKTING DDLLWAMATL
101: GFEDYIDPLK VYLMRYREME GDTKGSGKGG ESSAKRDGQP SQVSQFSQVP QQGSFSQGPY GNSQGSNMMV QMPGTE

Arabidopsis Description

NFYB10Nuclear transcription factor Y subunit B-10 [Source:UniProtKB/Swiss-Prot;Acc:Q67XJ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.