Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P20710_001 | Banana | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 76.64 | 69.49 |
| KRH54787 | Soybean | cytosol, mitochondrion, nucleus | 96.26 | 66.03 |
| Solyc06g069310.2.1 | Tomato | cytosol, mitochondrion, nucleus | 80.37 | 65.65 |
| KRH56716 | Soybean | cytosol, mitochondrion, nucleus | 89.72 | 61.15 |
| Solyc03g114400.2.1 | Tomato | cytosol, nucleus, plastid | 74.77 | 60.61 |
| KRH03842 | Soybean | cytosol, mitochondrion, nucleus | 89.72 | 60.0 |
| VIT_17s0000g04350.t01 | Wine grape | cytosol, mitochondrion, nucleus | 82.24 | 56.77 |
| PGSC0003DMT400059368 | Potato | cytosol | 79.44 | 54.84 |
| PGSC0003DMT400010436 | Potato | cytosol, mitochondrion, nucleus | 80.37 | 54.43 |
| Bra005976.1-P | Field mustard | cytosol, nucleus, plastid | 72.9 | 50.98 |
| PGSC0003DMT400063256 | Potato | cytosol, nucleus, plastid | 75.7 | 50.94 |
| AT5G23090.1 | Thale cress | cytosol, nucleus, plastid | 74.77 | 50.31 |
| AT5G08190.1 | Thale cress | cytosol, nucleus, plastid | 75.7 | 49.69 |
| CDY16839 | Canola | cytosol, nucleus, plastid | 77.57 | 49.11 |
| CDX87185 | Canola | cytosol, nucleus, plastid | 77.57 | 49.11 |
| Bra035959.1-P | Field mustard | cytosol, nucleus, plastid | 76.64 | 48.81 |
| CDX69967 | Canola | cytosol, nucleus, plastid | 74.77 | 48.48 |
| Bra009328.1-P | Field mustard | cytosol, nucleus, plastid | 74.77 | 48.19 |
| CDY21520 | Canola | cytosol, nucleus, plastid | 73.83 | 47.59 |
| GSMUA_Achr9P00790_001 | Banana | cytosol, nucleus, peroxisome | 71.03 | 43.93 |
| CDY44761 | Canola | cytosol | 74.77 | 33.33 |
| CDY40760 | Canola | nucleus | 72.9 | 31.45 |
| Bra028668.1-P | Field mustard | nucleus | 49.53 | 27.6 |
| Zm00001d050242_P002 | Maize | plastid | 70.09 | 25.25 |
| EES13767 | Sorghum | nucleus | 69.16 | 24.92 |
| Zm00001d032328_P005 | Maize | extracellular, plastid | 68.22 | 24.25 |
| TraesCS3A01G450700.1 | Wheat | cytosol, mitochondrion, nucleus | 64.49 | 23.71 |
| TraesCS3B01G487800.1 | Wheat | cytosol, mitochondrion, nucleus | 64.49 | 23.31 |
| TraesCS3D01G443500.1 | Wheat | cytosol, mitochondrion, nucleus | 64.49 | 23.15 |
| HORVU3Hr1G097680.4 | Barley | cytosol, mitochondrion, nucleus | 63.55 | 22.15 |
| KRH57816 | Soybean | cytosol | 14.02 | 19.23 |
| Os08t0383700-02 | Rice | cytosol, extracellular | 43.93 | 18.95 |
| KRH50875 | Soybean | nucleus | 20.56 | 18.18 |
| KRH02238 | Soybean | nucleus | 19.63 | 17.07 |
| KRH37126 | Soybean | nucleus | 16.82 | 15.38 |
| KRH12126 | Soybean | nucleus | 19.63 | 14.58 |
| KRH31905 | Soybean | cytosol, mitochondrion, nucleus | 19.63 | 14.48 |
| KRH34567 | Soybean | nucleus | 22.43 | 13.79 |
| KRH71548 | Soybean | nucleus | 18.69 | 13.61 |
| KRH73908 | Soybean | nucleus | 20.56 | 13.33 |
| KRG92229 | Soybean | nucleus | 21.5 | 13.29 |
| KRH32395 | Soybean | nucleus | 19.63 | 13.12 |
| KRG92877 | Soybean | nucleus | 16.82 | 13.04 |
| KRH66225 | Soybean | cytosol | 13.08 | 12.96 |
| KRH33913 | Soybean | nucleus | 16.82 | 12.77 |
| KRG89094 | Soybean | cytosol | 19.63 | 12.5 |
| KRH17618 | Soybean | plastid | 13.08 | 12.39 |
| KRH11589 | Soybean | nucleus | 19.63 | 12.28 |
| KRG88870 | Soybean | cytosol | 12.15 | 12.04 |
| KRH66068 | Soybean | nucleus | 18.69 | 11.49 |
| KRH36605 | Soybean | nucleus | 18.69 | 11.3 |
| KRG98494 | Soybean | nucleus | 19.63 | 11.17 |
| KRH67637 | Soybean | nucleus | 17.76 | 11.11 |
| KRH59594 | Soybean | nucleus | 21.5 | 11.11 |
| KRH46369 | Soybean | nucleus | 19.63 | 10.99 |
| KRG95922 | Soybean | nucleus | 15.89 | 10.43 |
| KRH40945 | Soybean | nucleus | 21.5 | 10.41 |
| KRH51197 | Soybean | nucleus | 20.56 | 9.87 |
| KRH01950 | Soybean | nucleus | 20.56 | 9.73 |
| KRH59435 | Soybean | nucleus | 19.63 | 9.33 |
| KRH43304 | Soybean | nucleus | 18.69 | 8.47 |
| KRH70381 | Soybean | cytosol | 16.82 | 7.96 |
| KRH49798 | Soybean | cytosol, golgi, nucleus | 15.89 | 7.36 |
| GSMUA_Achr1P20700_001 | Banana | cytosol | 1.87 | 3.77 |
Protein Annotations
| EMBL:ACUP02002467 | EnsemblPlants:KRH62965 | EnsemblPlantsGene:GLYMA_04G145000 | Gene3D:1.10.20.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046982 | InterPro:CBFA_NFYB_domain | InterPro:Histone-fold | InterPro:IPR009072 | ncoils:Coil |
| PANTHER:PTHR11064 | PANTHER:PTHR11064:SF8 | PFAM:PF00808 | ProteinID:KRH62965 | ProteinID:KRH62965.1 | SUPFAM:SSF47113 |
| UniParc:UPI000294B38F | UniProt:K7MS80 | MapMan:15.3.5.7.1.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:26539802..26541722
Molecular Weight (calculated)
12061.1 Da
IEP (calculated)
4.661
GRAVY (calculated)
-0.685
Length
107 amino acids
Sequence
(BLAST)
(BLAST)
001: FINLVSSESN EVCNKEERRT IAPEHVLKAL GVLGFGEYIE EVYAAYEQHK LETMQDSLKG AKWSNRAEMT EEEALAEQQR MFAEARARMN GGAITSKQPD
101: AHQSLES
101: AHQSLES
001: MDPMDIVGKS KEDASLPKAT MTKIIKEMLP PDVRVARDAQ DLLIECCVEF INLVSSESND VCNKEDKRTI APEHVLKALQ VLGFGEYIEE VYAAYEQHKY
101: ETMQDTQRSV KWNPGAQMTE EEAAAEQQRM FAEARARMNG GVSVPQPEHP ETDQRSPQS
101: ETMQDTQRSV KWNPGAQMTE EEAAAEQQRM FAEARARMNG GVSVPQPEHP ETDQRSPQS
Arabidopsis Description
DR1AT5G23090 protein [Source:UniProtKB/TrEMBL;Acc:B9DHA9]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.