Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G443500.1 | Wheat | cytosol, mitochondrion, nucleus | 98.63 | 96.31 |
| TraesCS3B01G487800.1 | Wheat | cytosol, mitochondrion, nucleus | 97.25 | 95.61 |
| GSMUA_Achr1P20700_001 | Banana | cytosol | 16.49 | 90.57 |
| HORVU3Hr1G097680.4 | Barley | cytosol, mitochondrion, nucleus | 87.97 | 83.39 |
| KRH56716 | Soybean | cytosol, mitochondrion, nucleus | 40.89 | 75.8 |
| VIT_17s0000g04350.t01 | Wine grape | cytosol, mitochondrion, nucleus | 39.52 | 74.19 |
| KRH03842 | Soybean | cytosol, mitochondrion, nucleus | 40.55 | 73.75 |
| AT5G08190.1 | Thale cress | cytosol, nucleus, plastid | 40.55 | 72.39 |
| PGSC0003DMT400010436 | Potato | cytosol, mitochondrion, nucleus | 39.18 | 72.15 |
| KRH54787 | Soybean | cytosol, mitochondrion, nucleus | 38.49 | 71.79 |
| AT5G23090.1 | Thale cress | cytosol, nucleus, plastid | 39.18 | 71.7 |
| GSMUA_Achr9P00790_001 | Banana | cytosol, nucleus, peroxisome | 41.92 | 70.52 |
| PGSC0003DMT400063256 | Potato | cytosol, nucleus, plastid | 38.49 | 70.44 |
| GSMUA_Achr1P20710_001 | Banana | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 28.18 | 69.49 |
| Bra005976.1-P | Field mustard | cytosol, nucleus, plastid | 36.43 | 69.28 |
| PGSC0003DMT400059368 | Potato | cytosol | 36.77 | 69.03 |
| CDX87185 | Canola | cytosol, nucleus, plastid | 39.86 | 68.64 |
| CDX69967 | Canola | cytosol, nucleus, plastid | 38.83 | 68.48 |
| Bra035959.1-P | Field mustard | cytosol, nucleus, plastid | 39.52 | 68.45 |
| CDY21520 | Canola | cytosol, nucleus, plastid | 38.83 | 68.07 |
| Bra009328.1-P | Field mustard | cytosol, nucleus, plastid | 38.83 | 68.07 |
| CDY16839 | Canola | cytosol, nucleus, plastid | 39.52 | 68.05 |
| KRH62965 | Soybean | cytosol, nucleus | 23.71 | 64.49 |
| EES13767 | Sorghum | nucleus | 60.82 | 59.6 |
| Zm00001d050242_P002 | Maize | plastid | 59.45 | 58.25 |
| Zm00001d032328_P005 | Maize | extracellular, plastid | 60.14 | 58.14 |
| Solyc12g038390.1.1 | Tomato | cytosol | 15.81 | 56.1 |
| Os08t0383700-02 | Rice | cytosol, extracellular | 41.24 | 48.39 |
| CDY44761 | Canola | cytosol | 38.83 | 47.08 |
| CDY40760 | Canola | nucleus | 37.46 | 43.95 |
| Bra028668.1-P | Field mustard | nucleus | 25.77 | 39.06 |
| TraesCS3A01G352900.1 | Wheat | nucleus | 13.06 | 23.31 |
| TraesCS1A01G411700.1 | Wheat | nucleus | 10.65 | 22.79 |
| TraesCS7A01G486400.1 | Wheat | cytosol | 8.25 | 22.64 |
| TraesCS3A01G026900.1 | Wheat | nucleus | 15.12 | 21.78 |
| TraesCS1A01G288500.3 | Wheat | nucleus | 13.4 | 21.43 |
| TraesCS2A01G173500.1 | Wheat | nucleus | 15.12 | 19.47 |
| TraesCS6A01G287400.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 10.65 | 18.13 |
| TraesCS3A01G457100.1 | Wheat | nucleus | 11.68 | 17.89 |
| TraesCS6A01G287300.1 | Wheat | nucleus | 14.43 | 17.07 |
| TraesCS3A01G457000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 9.62 | 16.28 |
| TraesCS7A01G214800.1 | Wheat | cytosol | 11.34 | 15.94 |
| TraesCS7A01G214600.1 | Wheat | nucleus | 13.75 | 15.04 |
| TraesCS2A01G359400.1 | Wheat | nucleus | 12.03 | 14.06 |
| TraesCS7A01G214700.1 | Wheat | nucleus | 13.06 | 13.87 |
| TraesCS7A01G214900.1 | Wheat | nucleus | 12.03 | 13.16 |
| TraesCS7A01G214500.1 | Wheat | nucleus | 13.4 | 13.09 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G450700.1 | EnsemblPlantsGene:TraesCS3A01G450700 | Gene3D:1.10.20.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046982 | InterPro:CBFA_NFYB_domain | InterPro:Histone-fold | InterPro:IPR009072 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF8 |
| PFAM:PF00808 | SEG:seg | SUPFAM:SSF47113 | MapMan:15.3.5.7.1.2 | : | : |
Description
No Description!
Coordinates
chr3A:+:689353061..689356907
Molecular Weight (calculated)
31484.0 Da
IEP (calculated)
4.668
GRAVY (calculated)
-0.635
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPMDIVGKS KEDVSLPKST MTKIIKEMLP PDVRVARDTQ DLLVECCVEF INLLSSESND VCSRDDKKTI APEHVIRALQ DLGFKEYVEE VYAAYEQHKL
101: ETLDSPKATK FTGIEMTEEE AVAEQQRMFA EARARMNNGA AKPKEPALEP QNQPQQPPQP HLQLHPQAQQ PPQPQPQLHY PQSQQPLQPF TQAPPQQPLH
201: PQLQQYTQAP PQQPLQPPLQ LYPQAQPEQP LQPQSSGSTT GTCVISAAAP SATGTTAAAT SAPAIPAIST AAPSATPADA SAAAATSTPA T
101: ETLDSPKATK FTGIEMTEEE AVAEQQRMFA EARARMNNGA AKPKEPALEP QNQPQQPPQP HLQLHPQAQQ PPQPQPQLHY PQSQQPLQPF TQAPPQQPLH
201: PQLQQYTQAP PQQPLQPPLQ LYPQAQPEQP LQPQSSGSTT GTCVISAAAP SATGTTAAAT SAPAIPAIST AAPSATPADA SAAAATSTPA T
001: MDPMDIVGKS KEDASLPKAT MTKIIKEMLP PDVRVARDAQ DLLIECCVEF INLVSSESND VCNKEDKRTI APEHVLKALQ VLGFGEYIEE VYAAYEQHKY
101: ETMDTQRSVK WNPGAQMTEE EAAAEQQRMF AEARARMNGG VSVPQPEHPE TDQRSPQS
101: ETMDTQRSVK WNPGAQMTEE EAAAEQQRMF AEARARMNGG VSVPQPEHPE TDQRSPQS
Arabidopsis Description
DR1AT5G23090 protein [Source:UniProtKB/TrEMBL;Acc:B9DHA9]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.