Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G203900.1 | Wheat | nucleus | 96.32 | 100.0 |
| TraesCSU01G051000.1 | Wheat | nucleus | 96.32 | 100.0 |
| TraesCSU01G050900.1 | Wheat | nucleus | 96.32 | 100.0 |
| TraesCS3D01G450100.1 | Wheat | nucleus | 96.32 | 99.46 |
| HORVU3Hr1G098500.1 | Barley | nucleus | 93.68 | 97.27 |
| EES04176 | Sorghum | nucleus | 67.89 | 70.88 |
| Zm00001d042196_P001 | Maize | nucleus | 66.32 | 70.39 |
| Os01t0935200-01 | Rice | nucleus | 65.26 | 70.06 |
| KRH50875 | Soybean | nucleus | 43.68 | 68.59 |
| KRH37126 | Soybean | nucleus | 42.11 | 68.38 |
| Zm00001d011915_P001 | Maize | nucleus | 59.47 | 66.08 |
| KRH02238 | Soybean | nucleus | 42.11 | 65.04 |
| GSMUA_Achr8P10020_001 | Banana | nucleus | 58.95 | 64.0 |
| VIT_05s0020g01350.t01 | Wine grape | nucleus | 46.32 | 63.77 |
| GSMUA_Achr11P... | Banana | nucleus | 55.26 | 63.25 |
| KRH31905 | Soybean | cytosol, mitochondrion, nucleus | 46.32 | 60.69 |
| KRH71548 | Soybean | nucleus | 45.79 | 59.18 |
| PGSC0003DMT400058414 | Potato | nucleus | 41.58 | 58.09 |
| Solyc01g067130.2.1 | Tomato | plastid | 41.58 | 57.25 |
| KRH12126 | Soybean | nucleus | 43.16 | 56.94 |
| GSMUA_Achr5P17480_001 | Banana | nucleus | 47.89 | 56.52 |
| VIT_07s0104g01640.t01 | Wine grape | nucleus | 46.32 | 50.29 |
| TraesCS1A01G411700.1 | Wheat | nucleus | 35.26 | 49.26 |
| Solyc06g009010.1.1 | Tomato | nucleus | 45.79 | 48.88 |
| PGSC0003DMT400037958 | Potato | nucleus | 45.79 | 48.88 |
| TraesCS3A01G352900.1 | Wheat | nucleus | 37.37 | 43.56 |
| TraesCS1A01G288500.3 | Wheat | nucleus | 41.05 | 42.86 |
| TraesCS7A01G486400.1 | Wheat | cytosol | 23.16 | 41.51 |
| TraesCS3A01G457000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 37.37 | 41.28 |
| TraesCS3A01G026900.1 | Wheat | nucleus | 40.53 | 38.12 |
| TraesCS2A01G173500.1 | Wheat | nucleus | 42.11 | 35.4 |
| TraesCS2A01G359400.1 | Wheat | nucleus | 41.05 | 31.33 |
| TraesCS7A01G214800.1 | Wheat | cytosol | 32.63 | 29.95 |
| TraesCS6A01G287300.1 | Wheat | nucleus | 35.79 | 27.64 |
| TraesCS6A01G287400.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 24.74 | 27.49 |
| TraesCS7A01G214900.1 | Wheat | nucleus | 33.68 | 24.06 |
| TraesCS7A01G214700.1 | Wheat | nucleus | 33.16 | 22.99 |
| TraesCS7A01G214600.1 | Wheat | nucleus | 32.11 | 22.93 |
| TraesCS7A01G214500.1 | Wheat | nucleus | 32.63 | 20.81 |
| TraesCS3A01G450700.1 | Wheat | cytosol, mitochondrion, nucleus | 17.89 | 11.68 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.5.51.2 | InterPro:CBFA_NFYB_domain | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | GO:GO:0046982 | InterPro:Histone-fold | InterPro:IPR009072 | PFAM:PF00808 | PRINTS:PR00615 |
| ScanProsite:PS00685 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF88 | SUPFAM:SSF47113 | EnsemblPlantsGene:TraesCS3A01G457100 | EnsemblPlants:TraesCS3A01G457100.1 |
| InterPro:Transcrpt_fac_NFYB/HAP3_CS | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:694533423..694533995
Molecular Weight (calculated)
19679.9 Da
IEP (calculated)
6.674
GRAVY (calculated)
-0.585
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MADHHYTHLG GGSGSGSGVG GGGGGGGGGS PPERLHGGGG SGDQGIKEQD RLLPIANVGR IMKQVLPPNA KVSKEAKETM QECVSEFISF VTGEASDKCH
101: KEKRKTVNGD DVCWAFSALG FDDYVDPMRR YLLKFRELEG DRAAAAASSR GGLPVPDAST SGAGASGSGN FMFEAMDRRD NTGPGTGRQF
101: KEKRKTVNGD DVCWAFSALG FDDYVDPMRR YLLKFRELEG DRAAAAASSR GGLPVPDAST SGAGASGSGN FMFEAMDRRD NTGPGTGRQF
001: MAGNYHSFQN PIPRYQNYNF GSSSSNHQHE HDGLVVVVED QQQEESMMVK EQDRLLPIAN VGRIMKNILP ANAKVSKEAK ETMQECVSEF ISFVTGEASD
101: KCHKEKRKTV NGDDICWAMA NLGFDDYAAQ LKKYLHRYRV LEGEKPNHHG KGGPKSSPDN
101: KCHKEKRKTV NGDDICWAMA NLGFDDYAAQ LKKYLHRYRV LEGEKPNHHG KGGPKSSPDN
Arabidopsis Description
NFYB5NF-YB5 [Source:UniProtKB/TrEMBL;Acc:A0A178VUG0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.