CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21520	Canola	cytosol, nucleus, plastid	64.17	92.77
CDX69967	Canola	cytosol, nucleus, plastid	63.75	92.73
AT5G08190.1	Thale cress	cytosol, nucleus, plastid	62.5	92.02
KRH56716	Soybean	cytosol, mitochondrion, nucleus	54.58	83.44
CDX87185	Canola	cytosol, nucleus, plastid	58.33	82.84
CDY16839	Canola	cytosol, nucleus, plastid	58.33	82.84
KRH03842	Soybean	cytosol, mitochondrion, nucleus	54.58	81.88
VIT_17s0000g04350.t01	Wine grape	cytosol, mitochondrion, nucleus	52.5	81.29
GSMUA_Achr1P20700_001	Banana	cytosol	17.92	81.13
PGSC0003DMT400010436	Potato	cytosol, mitochondrion, nucleus	53.33	81.01
KRH54787	Soybean	cytosol, mitochondrion, nucleus	51.67	79.49
Solyc06g069310.2.1	Tomato	cytosol, mitochondrion, nucleus	42.92	78.63
PGSC0003DMT400063256	Potato	cytosol, nucleus, plastid	52.08	78.62
PGSC0003DMT400059368	Potato	cytosol	50.42	78.06
Solyc03g114400.2.1	Tomato	cytosol, nucleus, plastid	41.25	75.0
KRH62965	Soybean	cytosol, nucleus	33.33	74.77
GSMUA_Achr1P20710_001	Banana	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	35.0	71.19
CDY40760	Canola	nucleus	70.42	68.15
GSMUA_Achr9P00790_001	Banana	cytosol, nucleus, peroxisome	47.5	65.9
Zm00001d050242_P002	Maize	plastid	48.75	39.39
EES13767	Sorghum	nucleus	48.75	39.39
Zm00001d032328_P005	Maize	extracellular, plastid	48.75	38.87
TraesCS3A01G450700.1	Wheat	cytosol, mitochondrion, nucleus	47.08	38.83
TraesCS3B01G487800.1	Wheat	cytosol, mitochondrion, nucleus	47.08	38.18
TraesCS3D01G443500.1	Wheat	cytosol, mitochondrion, nucleus	47.08	37.92
HORVU3Hr1G097680.4	Barley	cytosol, mitochondrion, nucleus	45.42	35.5
CDX74880	Canola	nucleus	15.83	26.76
CDY07691	Canola	nucleus	16.67	24.1
CDY14422	Canola	nucleus	16.25	23.78
CDY21888	Canola	nucleus	15.0	22.93
CDY20167	Canola	nucleus	15.0	22.78
CDX95014	Canola	nucleus	12.5	22.73
CDY18462	Canola	nucleus	16.25	22.29
CDY41061	Canola	nucleus	17.08	22.28
CDY40552	Canola	nucleus	17.08	22.16
CDY28916	Canola	nucleus	17.08	22.04
CDY25955	Canola	nucleus	17.08	21.93
CDY30123	Canola	nucleus	15.0	21.82
Os08t0383700-02	Rice	cytosol, extracellular	21.67	20.97
CDY72254	Canola	nucleus	15.83	20.43
CDY18460	Canola	nucleus	16.25	20.1
CDY53021	Canola	nucleus	12.92	20.0
CDX75855	Canola	nucleus	15.42	19.89
CDX83320	Canola	nucleus	12.92	19.87
CDX82424	Canola	nucleus	15.42	19.58
CDX79714	Canola	nucleus	16.67	18.02
CDX91501	Canola	nucleus	15.83	17.92
CDX80136	Canola	nucleus	12.5	17.44
CDY25952	Canola	nucleus	15.0	17.39
CDY41063	Canola	nucleus	15.0	17.22
CDX93117	Canola	nucleus	15.0	17.22
CDX89608	Canola	nucleus	15.0	17.22
CDX73560	Canola	nucleus	15.83	16.59
CDX77785	Canola	cytosol	9.17	16.42
CDY17715	Canola	nucleus	15.42	16.02
CDX81449	Canola	nucleus	13.75	15.87
CDY37212	Canola	nucleus	13.75	15.87
CDY46752	Canola	nucleus	17.5	15.73
CDX78169	Canola	nucleus	16.67	15.56
CDY00411	Canola	nucleus	14.17	14.78
CDY01304	Canola	nucleus	14.17	14.72
CDY38832	Canola	nucleus	12.08	12.66
CDY68650	Canola	nucleus	14.17	11.33
CDY30639	Canola	nucleus	14.58	10.23

Protein Annotations

Gene3D:1.10.20.10	MapMan:15.3.5.7.1.2	GO:A0A078I4G1	UniProt:A0A078I4G1	InterPro:CBFA_NFYB_domain	EnsemblPlants:CDY44761
ProteinID:CDY44761	ProteinID:CDY44761.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0046982	EnsemblPlantsGene:GSBRNA2T00080759001	InterPro:Histone-fold
InterPro:IPR009072	PFAM:PF00808	PANTHER:PTHR11064	PANTHER:PTHR11064:SF8	SUPFAM:SSF47113	UniParc:UPI0004EDD764
SEG:seg	:	:	:	:	:

Description

BnaC02g01260DBnaC02g01260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I4G1]

Coordinates

chrLK032601:+:15258..18051

Molecular Weight (calculated)

27349.0 Da

IEP (calculated)

7.507

GRAVY (calculated)

-0.523

Length

240 amino acids

Sequence
(BLAST)

001: MQRFIDPFGE KVPSTRLFLV SIFFPNQLVK KKRNGERKTA VQHVPILRRD SVSRFVSFPG SPSLIRLRFD LLKLERKKTM DPMDIVGKSK EDASLPKATM
101: TKIIKEMLPA DVRVARDAQD LLIECCVEFI NLISSESNEV CNKEDKRTIA PEHVLKALHV LGFGEYVEEV YSAYEQHKYE TMQDSQRSVK MNTGAEMTEE
201: EAAAEQQRMF AEARARMNGG GVSVPQPEQQ LDTQQPNLQS

Best Arabidopsis Sequence Match ( AT5G23090.1 )
(BLAST)

001: MDPMDIVGKS KEDASLPKAT MTKIIKEMLP PDVRVARDAQ DLLIECCVEF INLVSSESND VCNKEDKRTI APEHVLKALQ VLGFGEYIEE VYAAYEQHKY
101: ETMQDTQRSV KWNPGAQMTE EEAAAEQQRM FAEARARMNG GVSVPQPEHP ETDQRSPQS

Arabidopsis Description

DR1AT5G23090 protein [Source:UniProtKB/TrEMBL;Acc:B9DHA9]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.