Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017209.1-P | Field mustard | nucleus | 96.77 | 94.24 |
| CDY18460 | Canola | nucleus | 97.31 | 93.3 |
| CDY18462 | Canola | nucleus | 84.95 | 90.29 |
| AT2G37060.2 | Thale cress | nucleus | 70.97 | 76.3 |
| PGSC0003DMT400004366 | Potato | nucleus | 53.23 | 70.71 |
| Solyc09g007290.2.1 | Tomato | nucleus | 47.85 | 68.99 |
| VIT_08s0040g03260.t01 | Wine grape | nucleus | 59.14 | 68.32 |
| CDX79714 | Canola | nucleus | 75.27 | 63.06 |
| CDX74880 | Canola | nucleus | 47.85 | 62.68 |
| TraesCS7A01G486400.1 | Wheat | cytosol | 34.95 | 61.32 |
| Zm00001d038397_P005 | Maize | nucleus | 58.6 | 61.24 |
| KXG22176 | Sorghum | nucleus | 58.06 | 60.0 |
| GSMUA_Achr8P17450_001 | Banana | nucleus | 62.37 | 59.79 |
| TraesCS7B01G501400.1 | Wheat | cytoskeleton, cytosol, nucleus | 36.56 | 59.65 |
| CDY21888 | Canola | nucleus | 49.46 | 58.6 |
| CDY20167 | Canola | nucleus | 49.46 | 58.23 |
| TraesCS5B01G454900.1 | Wheat | cytoskeleton, cytosol, nucleus | 37.63 | 57.38 |
| Os05t0463800-02 | Rice | nucleus | 56.99 | 57.3 |
| TraesCS1D01G287500.1 | Wheat | nucleus | 54.84 | 56.04 |
| TraesCS1A01G288500.3 | Wheat | nucleus | 54.84 | 56.04 |
| Zm00001d010574_P001 | Maize | nucleus | 55.91 | 55.62 |
| TraesCS1B01G297900.2 | Wheat | nucleus | 54.3 | 55.49 |
| CDX73560 | Canola | nucleus | 68.28 | 55.46 |
| CDY30123 | Canola | nucleus | 48.39 | 54.55 |
| CDY07691 | Canola | nucleus | 48.39 | 54.22 |
| CDY46752 | Canola | nucleus | 76.34 | 53.18 |
| CDY14422 | Canola | nucleus | 45.16 | 51.22 |
| CDY41061 | Canola | nucleus | 50.0 | 50.54 |
| CDY25955 | Canola | nucleus | 50.54 | 50.27 |
| CDX75855 | Canola | nucleus | 50.0 | 50.0 |
| CDY40552 | Canola | nucleus | 49.46 | 49.73 |
| CDY28916 | Canola | nucleus | 49.46 | 49.46 |
| CDX82424 | Canola | nucleus | 50.0 | 49.21 |
| CDX78169 | Canola | nucleus | 67.74 | 49.03 |
| CDY53021 | Canola | nucleus | 38.17 | 45.81 |
| CDX95014 | Canola | nucleus | 32.26 | 45.45 |
| CDX83320 | Canola | nucleus | 37.63 | 44.87 |
| CDX91501 | Canola | nucleus | 50.54 | 44.34 |
| CDX77785 | Canola | cytosol | 29.57 | 41.04 |
| CDX80136 | Canola | nucleus | 37.63 | 40.7 |
| HORVU1Hr1G071620.5 | Barley | nucleus, plastid | 54.84 | 40.48 |
| CDY37212 | Canola | nucleus | 44.09 | 39.42 |
| CDX93117 | Canola | nucleus | 44.09 | 39.23 |
| CDX89608 | Canola | nucleus | 44.09 | 39.23 |
| CDX81449 | Canola | nucleus | 43.01 | 38.46 |
| CDY25952 | Canola | nucleus | 40.32 | 36.23 |
| CDY41063 | Canola | nucleus | 40.32 | 35.89 |
| CDY17715 | Canola | nucleus | 40.32 | 32.47 |
| CDY00411 | Canola | nucleus | 34.95 | 28.26 |
| CDY01304 | Canola | nucleus | 34.95 | 28.14 |
| CDY16839 | Canola | cytosol, nucleus, plastid | 21.51 | 23.67 |
| CDX87185 | Canola | cytosol, nucleus, plastid | 21.51 | 23.67 |
| CDX69967 | Canola | cytosol, nucleus, plastid | 20.97 | 23.64 |
| CDY21520 | Canola | cytosol, nucleus, plastid | 20.97 | 23.49 |
| CDY68650 | Canola | nucleus | 34.41 | 21.33 |
| CDY38832 | Canola | nucleus | 25.81 | 20.96 |
| CDY30639 | Canola | nucleus | 35.48 | 19.3 |
| CDY44761 | Canola | cytosol | 20.43 | 15.83 |
| CDY40760 | Canola | nucleus | 19.89 | 14.92 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.5.51.2 | GO:A0A078K009 | UniProt:A0A078K009 | InterPro:CBFA_NFYB_domain | EnsemblPlants:CDY72254 |
| ProteinID:CDY72254 | ProteinID:CDY72254.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| GO:GO:0046982 | EnsemblPlantsGene:GSBRNA2T00025985001 | InterPro:Histone-fold | InterPro:IPR009072 | PFAM:PF00808 | PRINTS:PR00615 |
| ScanProsite:PS00685 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF85 | SUPFAM:SSF47113 | InterPro:Transcrpt_fac_NFYB/HAP3_CS | UniParc:UPI0004EE744B |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng76740DBnaCnng76740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K009]
Coordinates
chrLK049750:-:221..1677
Molecular Weight (calculated)
20669.1 Da
IEP (calculated)
7.620
GRAVY (calculated)
-0.677
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MAESQTNSPG DQSPRSSSHV REQDRFLPIA NISRIMKRGL PANGKIAKDA KEILQECVSE FISFVTSEAS DKCQREKRKT INGDDLLWAM ATLGFEEYIE
101: PLKLYLTRYR EVYGDSKGSA RGGDANANRD GQSSQNGQFS QFAHQGSYPQ GPYGNSQVTF PLLLFHTHSE YVSATHITTQ IISSAK
101: PLKLYLTRYR EVYGDSKGSA RGGDANANRD GQSSQNGQFS QFAHQGSYPQ GPYGNSQVTF PLLLFHTHSE YVSATHITTQ IISSAK
001: MAESQAKSPG GCGSHESGGD QSPRSLHVRE QDRFLPIANI SRIMKRGLPA NGKIAKDAKE IVQECVSEFI SFVTSEASDK CQREKRKTIN GDDLLWAMAT
101: LGFEDYMEPL KVYLMRYREM EGDTKGSAKG GDPNAKKDGQ SSQNGQFSQL AHQGPYGNSQ AQQHMMVPMP GTD
101: LGFEDYMEPL KVYLMRYREM EGDTKGSAKG GDPNAKKDGQ SSQNGQFSQL AHQGPYGNSQ AQQHMMVPMP GTD
Arabidopsis Description
NFYB8Nuclear transcription factor Y subunit B-8 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYK4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.