Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- nucleus 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006991.1-P | Field mustard | nucleus | 69.26 | 100.0 |
| CDX73560 | Canola | nucleus | 77.04 | 86.46 |
| AT3G53340.5 | Thale cress | nucleus | 58.75 | 85.8 |
| CDY18462 | Canola | nucleus | 52.92 | 77.71 |
| PGSC0003DMT400004366 | Potato | nucleus | 40.08 | 73.57 |
| VIT_08s0040g03260.t01 | Wine grape | nucleus | 43.58 | 69.57 |
| CDY18460 | Canola | nucleus | 51.36 | 68.04 |
| CDY72254 | Canola | nucleus | 49.03 | 67.74 |
| CDX74880 | Canola | nucleus | 37.35 | 67.61 |
| Solyc09g007290.2.1 | Tomato | nucleus | 33.85 | 67.44 |
| CDX79714 | Canola | nucleus | 55.64 | 64.41 |
| KXG22176 | Sorghum | nucleus | 43.58 | 62.22 |
| GSMUA_Achr8P17450_001 | Banana | nucleus | 46.3 | 61.34 |
| TraesCS7A01G486400.1 | Wheat | cytosol | 25.29 | 61.32 |
| Zm00001d038397_P005 | Maize | nucleus | 42.41 | 61.24 |
| TraesCS7B01G501400.1 | Wheat | cytoskeleton, cytosol, nucleus | 26.85 | 60.53 |
| CDY21888 | Canola | nucleus | 36.97 | 60.51 |
| CDY20167 | Canola | nucleus | 36.97 | 60.13 |
| Os05t0463800-02 | Rice | nucleus | 43.19 | 60.0 |
| Zm00001d010574_P001 | Maize | nucleus | 42.8 | 58.82 |
| TraesCS1B01G297900.2 | Wheat | nucleus | 41.25 | 58.24 |
| TraesCS1D01G287500.1 | Wheat | nucleus | 40.86 | 57.69 |
| TraesCS1A01G288500.3 | Wheat | nucleus | 40.86 | 57.69 |
| TraesCS5B01G454900.1 | Wheat | cytoskeleton, cytosol, nucleus | 26.85 | 56.56 |
| CDY30123 | Canola | nucleus | 36.19 | 56.36 |
| CDY07691 | Canola | nucleus | 36.19 | 56.02 |
| CDY46752 | Canola | nucleus | 57.59 | 55.43 |
| CDY41061 | Canola | nucleus | 37.74 | 52.72 |
| CDY25955 | Canola | nucleus | 38.13 | 52.41 |
| CDY40552 | Canola | nucleus | 37.35 | 51.89 |
| CDY14422 | Canola | nucleus | 33.07 | 51.83 |
| CDY28916 | Canola | nucleus | 37.35 | 51.61 |
| CDX75855 | Canola | nucleus | 36.97 | 51.08 |
| CDX82424 | Canola | nucleus | 36.97 | 50.26 |
| CDX91501 | Canola | nucleus | 39.3 | 47.64 |
| CDY53021 | Canola | nucleus | 28.4 | 47.1 |
| CDX77785 | Canola | cytosol | 24.12 | 46.27 |
| CDX83320 | Canola | nucleus | 28.02 | 46.15 |
| CDX95014 | Canola | nucleus | 22.96 | 44.7 |
| HORVU1Hr1G071620.5 | Barley | nucleus, plastid | 41.63 | 42.46 |
| CDX80136 | Canola | nucleus | 28.02 | 41.86 |
| CDY37212 | Canola | nucleus | 33.07 | 40.87 |
| CDX93117 | Canola | nucleus | 33.07 | 40.67 |
| CDX89608 | Canola | nucleus | 33.07 | 40.67 |
| CDX81449 | Canola | nucleus | 32.3 | 39.9 |
| CDY25952 | Canola | nucleus | 28.79 | 35.75 |
| CDY41063 | Canola | nucleus | 28.79 | 35.41 |
| CDY17715 | Canola | nucleus | 28.79 | 32.03 |
| CDY00411 | Canola | nucleus | 26.85 | 30.0 |
| CDY01304 | Canola | nucleus | 26.85 | 29.87 |
| CDY21520 | Canola | cytosol, nucleus, plastid | 15.56 | 24.1 |
| CDX69967 | Canola | cytosol, nucleus, plastid | 15.18 | 23.64 |
| CDY38832 | Canola | nucleus | 20.62 | 23.14 |
| CDY68650 | Canola | nucleus | 26.46 | 22.67 |
| CDX87185 | Canola | cytosol, nucleus, plastid | 14.79 | 22.49 |
| CDY16839 | Canola | cytosol, nucleus, plastid | 14.79 | 22.49 |
| CDY30639 | Canola | nucleus | 27.24 | 20.47 |
| CDY44761 | Canola | cytosol | 15.56 | 16.67 |
| CDY40760 | Canola | nucleus | 15.56 | 16.13 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.5.51.2 | GO:A0A078CQ22 | InterPro:CBFA_NFYB_domain | EnsemblPlants:CDX78169 | ProteinID:CDX78169 |
| ProteinID:CDX78169.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046982 |
| EnsemblPlantsGene:GSBRNA2T00129475001 | InterPro:Histone-fold | InterPro:IPR009072 | PFAM:PF00808 | PRINTS:PR00615 | ScanProsite:PS00685 |
| PANTHER:PTHR11064 | PANTHER:PTHR11064:SF85 | SUPFAM:SSF47113 | SignalP:SignalP-noTM | InterPro:Transcrpt_fac_NFYB/HAP3_CS | UniParc:UPI0004EDEFB4 |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g33640D
Coordinates
chrLK031814:-:1513908..1515843
Molecular Weight (calculated)
28389.7 Da
IEP (calculated)
9.995
GRAVY (calculated)
-0.574
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRTKNFGLQ IMLSTFLNLI QSDKWTVIKK SKSLISQSQS FSPLVFSSVR SIFSFSSDHP HSLPPFSNHH LFLALALRFM ADSQAKSSGM SPGVGGGGSH
101: ESGGDQSPRS MNVREQDRFL PIANISRIMK RGLPANGKIA KDAKETMQEC VSEFISFVTS EASDKCQREK RKTINGDDLL WAMTTLGFEE YVEPLKFYLT
201: RYREGDNKGS GKGGESSAKR DGQPGQFLQQ GQQGSFSQGP YGNAQGSHMM VQMPNAE
101: ESGGDQSPRS MNVREQDRFL PIANISRIMK RGLPANGKIA KDAKETMQEC VSEFISFVTS EASDKCQREK RKTINGDDLL WAMTTLGFEE YVEPLKFYLT
201: RYREGDNKGS GKGGESSAKR DGQPGQFLQQ GQQGSFSQGP YGNAQGSHMM VQMPNAE
001: MAESQAKSPG GCGSHESGGD QSPRSLHVRE QDRFLPIANI SRIMKRGLPA NGKIAKDAKE IVQECVSEFI SFVTSEASDK CQREKRKTIN GDDLLWAMAT
101: LGFEDYMEPL KVYLMRYREM EGDTKGSAKG GDPNAKKDGQ SSQNGQFSQL AHQGPYGNSQ AQQHMMVPMP GTD
101: LGFEDYMEPL KVYLMRYREM EGDTKGSAKG GDPNAKKDGQ SSQNGQFSQL AHQGPYGNSQ AQQHMMVPMP GTD
Arabidopsis Description
NFYB8Nuclear transcription factor Y subunit B-8 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYK4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.