Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g114400.2.1 | Tomato | cytosol, nucleus, plastid | 88.55 | 87.88 |
| PGSC0003DMT400010436 | Potato | cytosol, mitochondrion, nucleus | 100.0 | 82.91 |
| Solyc12g038390.1.1 | Tomato | cytosol | 51.15 | 81.71 |
| KRH62965 | Soybean | cytosol, nucleus | 65.65 | 80.37 |
| KRH56716 | Soybean | cytosol, mitochondrion, nucleus | 84.73 | 70.7 |
| VIT_17s0000g04350.t01 | Wine grape | cytosol, mitochondrion, nucleus | 83.21 | 70.32 |
| KRH03842 | Soybean | cytosol, mitochondrion, nucleus | 84.73 | 69.38 |
| KRH54787 | Soybean | cytosol, mitochondrion, nucleus | 80.15 | 67.31 |
| AT5G23090.1 | Thale cress | cytosol, nucleus, plastid | 77.86 | 64.15 |
| AT5G08190.1 | Thale cress | cytosol, nucleus, plastid | 79.39 | 63.8 |
| Bra005976.1-P | Field mustard | cytosol, nucleus, plastid | 74.05 | 63.4 |
| CDX69967 | Canola | cytosol, nucleus, plastid | 79.39 | 63.03 |
| Bra009328.1-P | Field mustard | cytosol, nucleus, plastid | 79.39 | 62.65 |
| CDY21520 | Canola | cytosol, nucleus, plastid | 78.63 | 62.05 |
| Bra035959.1-P | Field mustard | cytosol, nucleus, plastid | 78.63 | 61.31 |
| CDY16839 | Canola | cytosol, nucleus, plastid | 78.63 | 60.95 |
| CDX87185 | Canola | cytosol, nucleus, plastid | 78.63 | 60.95 |
| CDY44761 | Canola | cytosol | 78.63 | 42.92 |
| CDY40760 | Canola | nucleus | 77.86 | 41.13 |
| Bra028668.1-P | Field mustard | nucleus | 54.2 | 36.98 |
| Solyc04g009520.2.1 | Tomato | nucleus | 20.61 | 31.4 |
| Solyc09g007290.2.1 | Tomato | nucleus | 22.14 | 22.48 |
| Solyc04g049910.2.1 | Tomato | nucleus | 24.43 | 19.39 |
| Solyc11g012750.1.1 | Tomato | nucleus | 20.61 | 17.76 |
| Solyc09g074760.1.1 | Tomato | nucleus | 17.56 | 16.67 |
| Solyc01g067130.2.1 | Tomato | plastid | 16.79 | 15.94 |
| Solyc07g065500.1.1 | Tomato | nucleus | 20.61 | 14.84 |
| Solyc01g099320.2.1 | Tomato | nucleus | 16.03 | 14.38 |
| Solyc12g006120.1.1 | Tomato | nucleus | 22.14 | 14.36 |
| Solyc05g005440.1.1 | Tomato | cytosol | 20.61 | 12.98 |
| Solyc06g009010.1.1 | Tomato | nucleus | 17.56 | 12.92 |
| Solyc05g015550.1.1 | Tomato | mitochondrion | 21.37 | 12.79 |
| Solyc02g032190.1.1 | Tomato | cytosol, nucleus, plastid | 9.16 | 12.63 |
| Solyc04g015060.1.1 | Tomato | nucleus | 22.14 | 12.24 |
| Solyc05g005350.1.1 | Tomato | nucleus | 19.85 | 11.87 |
| Solyc05g005390.1.1 | Tomato | nucleus, plastid | 21.37 | 11.76 |
| Solyc04g054150.1.1 | Tomato | nucleus | 16.79 | 11.7 |
| Solyc05g005360.1.1 | Tomato | nucleus | 19.08 | 11.16 |
| Solyc12g027650.1.1 | Tomato | nucleus | 17.56 | 11.06 |
| Solyc05g005370.1.1 | Tomato | nucleus | 18.32 | 10.71 |
| Solyc10g009440.2.1 | Tomato | plastid | 19.08 | 10.5 |
| Solyc05g005340.2.1 | Tomato | extracellular | 9.92 | 10.48 |
| Solyc07g065580.1.1 | Tomato | nucleus | 12.21 | 8.99 |
| Solyc07g065570.1.1 | Tomato | nucleus | 11.45 | 7.98 |
| Solyc05g005380.1.1 | Tomato | plastid | 21.37 | 7.84 |
| Solyc02g032180.1.1 | Tomato | nucleus | 9.92 | 4.53 |
Protein Annotations
| EnsemblPlants:Solyc06g069310.2.1 | EnsemblPlantsGene:Solyc06g069310.2 | Gene3D:1.10.20.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046982 | InterPro:CBFA_NFYB_domain |
| InterPro:Histone-fold | InterPro:IPR009072 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF8 | PFAM:PF00808 | SUPFAM:SSF47113 |
| UniParc:UPI000276696A | UniProt:K4C8A4 | MapMan:15.3.5.7.1.2 | : | : | : |
Description
No Description!
Coordinates
chr6:-:43064659..43068700
Molecular Weight (calculated)
14679.3 Da
IEP (calculated)
4.250
GRAVY (calculated)
-0.559
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPPDVRVAR DTQDLLIECC VEFINLISSE SNEVCNREEK RTIAPEHVLK ALQVLGFGEY IEEVYAAYEQ HKLETMDTVR AGKCSNGAEM TEEEALAEQQ
101: RMFAEARARM NGGVTGPPKQ QDSEAEQTLN S
101: RMFAEARARM NGGVTGPPKQ QDSEAEQTLN S
001: MDPMDIVGKS KEDASLPKAT MTKIIKEMLP PDVRVARDAQ DLLIECCVEF INLVSSESND VCNKEDKRTI APEHVLKALQ VLGFGEYIEE VYAAYEQHKY
101: ETMDTQRSVK WNPGAQMTEE EAAAEQQRMF AEARARMNGG VSVPQPEHPE TDQRSPQS
101: ETMDTQRSVK WNPGAQMTEE EAAAEQQRMF AEARARMNGG VSVPQPEHPE TDQRSPQS
Arabidopsis Description
DR1AT5G23090 protein [Source:UniProtKB/TrEMBL;Acc:B9DHA9]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.