Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH57816 | Soybean | cytosol | 27.68 | 79.49 |
| KRH66225 | Soybean | cytosol | 37.95 | 78.7 |
| KRG88870 | Soybean | cytosol | 35.71 | 74.07 |
| Os03t0413000-01 | Rice | nucleus | 69.2 | 70.78 |
| Os05t0573500-01 | Rice | nucleus | 33.93 | 53.15 |
| Os05t0463800-02 | Rice | nucleus | 42.86 | 51.89 |
| Os01t0834400-02 | Rice | nucleus | 38.39 | 48.31 |
| Os01t0935200-01 | Rice | nucleus | 34.38 | 43.5 |
| Os08t0174500-01 | Rice | nucleus | 51.34 | 38.72 |
| Os02t0725700-01 | Rice | nucleus | 35.71 | 31.5 |
| Os06t0285200-01 | Rice | nucleus | 34.82 | 31.2 |
| Os02t0725900-01 | Rice | nucleus | 18.75 | 22.58 |
| Os08t0383700-02 | Rice | cytosol, extracellular | 6.25 | 5.65 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.5.51.2 | EntrezGene:4343856 | EMBL:AK111621 | EMBL:AK112118 | ProteinID:BAD31143.1 |
| ProteinID:BAD32022.1 | ProteinID:BAF22144.1 | ProteinID:BAF64445.1 | ProteinID:BAT02572.1 | InterPro:CBFA_NFYB_domain | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046982 | InterPro:Histone-fold |
| InterPro:IPR009072 | EnsemblPlantsGene:Os07g0606600 | EnsemblPlants:Os07t0606600-01 | PFAM:PF00808 | PRINTS:PR00615 | ScanProsite:PS00685 |
| PANTHER:PTHR11064 | PANTHER:PTHR11064:SF87 | UniProt:Q69J40 | SUPFAM:SSF47113 | InterPro:Transcrpt_fac_NFYB/HAP3_CS | UniParc:UPI00003FE83C |
| RefSeq:XP_015645521.1 | SEG:seg | : | : | : | : |
Description
HAP3F SUBUNIT OF CCAAT-BOX BINDING COMPLEXSimilar to Nuclear factor Y transcription factor subunit B homolog. (Os07t0606600-01)
Coordinates
chr7:-:24921067..24921998
Molecular Weight (calculated)
23274.1 Da
IEP (calculated)
7.077
GRAVY (calculated)
-0.694
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MPDSDNESGG PSNAGEYASA REQDRFLPIA NVSRIMKRAL PANAKISKDA KETVQECVSE FISFITGEAS DKCQREKRKT INGDDLLWAM TTLGFEDYID
101: PLKLYLHKFR ELEGEKAIGA AGSGGGGAAS SGGSGSGSGS HHHQDASRNN GGYGMYGGGG GMIMMMGQPM YGSPPASSAG YAQPPPPHHH HHQMVMGGKG
201: AYGHGGGGGG GPSPSSGYGR QDRL
101: PLKLYLHKFR ELEGEKAIGA AGSGGGGAAS SGGSGSGSGS HHHQDASRNN GGYGMYGGGG GMIMMMGQPM YGSPPASSAG YAQPPPPHHH HHQMVMGGKG
201: AYGHGGGGGG GPSPSSGYGR QDRL
001: MADSDNDSGG HKDGGNASTR EQDRFLPIAN VSRIMKKALP ANAKISKDAK ETVQECVSEF ISFITGEASD KCQREKRKTI NGDDLLWAMT TLGFEDYVEP
101: LKVYLQKYRE VEGEKTTTAG RQGDKEGGGG GGGAGSGSGG APMYGGGMVT TMGHQFSHHF S
101: LKVYLQKYRE VEGEKTTTAG RQGDKEGGGG GGGAGSGSGG APMYGGGMVT TMGHQFSHHF S
Arabidopsis Description
NFYB3Nuclear transcription factor Y subunit B-3 [Source:UniProtKB/Swiss-Prot;Acc:O23310]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.