Factsheet for Os03t0413000-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94693	Sorghum	nucleus	85.84	83.56
KRH66225	Soybean	cytosol	40.64	82.41
TraesCS3A01G026900.1	Wheat	nucleus	75.8	82.18
KRH57816	Soybean	cytosol	29.22	82.05
HORVU7Hr1G105460.1	Barley	nucleus	64.38	81.5
Zm00001d029505_P001	Maize	nucleus	81.74	80.63
TraesCS3B01G017400.1	Wheat	nucleus	75.8	78.3
HORVU7Hr1G105500.6	Barley	nucleus	64.38	76.22
KRG88870	Soybean	cytosol	37.44	75.93
Os07t0606600-01	Rice	nucleus	70.78	69.2
Os05t0573500-01	Rice	nucleus	34.25	52.45
Os05t0463800-02	Rice	nucleus	43.84	51.89
Os01t0834400-02	Rice	nucleus	39.73	48.88
Os01t0935200-01	Rice	nucleus	35.16	43.5
Os08t0174500-01	Rice	nucleus	49.32	36.36
Os02t0725700-01	Rice	nucleus	35.16	30.32
Os06t0285200-01	Rice	nucleus	34.25	30.0
Os02t0725900-01	Rice	nucleus	20.55	24.19
Os08t0383700-02	Rice	cytosol, extracellular	7.76	6.85

Protein Annotations

Gene3D:1.10.20.10	MapMan:15.5.51.2	EntrezGene:4333105	ProteinID:AAS07059.1	ProteinID:ABF96585.1	EMBL:AK060225
ProteinID:BAF12272.1	ProteinID:BAF64448.1	ProteinID:BAS84677.1	InterPro:CBFA_NFYB_domain	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	GO:GO:0046982	InterPro:Histone-fold
InterPro:IPR009072	EnsemblPlantsGene:Os03g0413000	EnsemblPlants:Os03t0413000-01	PFAM:PF00808	PRINTS:PR00615	ScanProsite:PS00685
PANTHER:PTHR11064	PANTHER:PTHR11064:SF87	UniProt:Q75IZ7	SUPFAM:SSF47113	InterPro:Transcrpt_fac_NFYB/HAP3_CS	UniParc:UPI0000052371
RefSeq:XP_015631006.1	SEG:seg	:	:	:	:

Description

HAP3I SUBUNIT OF CCAAT-BOX BINDING COMPLEXSimilar to Potential histone-like transcription factor. (Os03t0413000-01)

Coordinates

chr3:+:17085270..17086334

Molecular Weight (calculated)

22987.8 Da

IEP (calculated)

7.322

GRAVY (calculated)

-0.772

Length

219 amino acids

Sequence
(BLAST)

001: MPDSDNDSGG PSNYAGGELS SPREQDRFLP IANVSRIMKK ALPANAKISK DAKETVQECV SEFISFITGE ASDKCQREKR KTINGDDLLW AMTTLGFEDY
101: VDPLKHYLHK FREIEGERAA ASTTGAGTSA ASTTPPQQQH TANAAGGYAG YAAPGAGPGG MMMMMGQPMY GSPPPPPQQQ QQQHHHMAMG GRGGFGHHPG
201: GGGGGSSSSS GHGRQNRGA

Best Arabidopsis Sequence Match ( AT4G14540.1 )
(BLAST)

001: MADSDNDSGG HKDGGNASTR EQDRFLPIAN VSRIMKKALP ANAKISKDAK ETVQECVSEF ISFITGEASD KCQREKRKTI NGDDLLWAMT TLGFEDYVEP
101: LKVYLQKYRE VEGEKTTTAG RQGDKEGGGG GGGAGSGSGG APMYGGGMVT TMGHQFSHHF S

Arabidopsis Description

NFYB3Nuclear transcription factor Y subunit B-3 [Source:UniProtKB/Swiss-Prot;Acc:O23310]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.