Factsheet for AT2G13570.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89608	Canola	nucleus	86.98	89.47
CDX93117	Canola	nucleus	86.51	89.0
Bra013143.1-P	Field mustard	nucleus	86.51	89.0
CDY37212	Canola	nucleus	83.26	86.06
Bra037211.1-P	Field mustard	nucleus	83.26	86.06
CDX81449	Canola	nucleus	82.33	85.1
PGSC0003DMT400043176	Potato	nucleus	53.49	58.08
AT4G14540.1	Thale cress	nucleus	41.86	55.9
Solyc12g027650.1.1	Tomato	nucleus	52.09	53.85
KRH59594	Soybean	nucleus	49.3	51.21
AT2G37060.2	Thale cress	nucleus	40.93	50.87
KRH40945	Soybean	nucleus	51.63	50.23
AT2G47810.1	Thale cress	nucleus	36.74	49.38
AT1G09030.1	Thale cress	nucleus	31.63	48.92
AT5G47640.1	Thale cress	nucleus	42.79	48.42
AT3G53340.5	Thale cress	nucleus	39.53	48.3
AT2G38880.8	Thale cress	nucleus	35.81	46.95
AT1G21970.1	Thale cress	nucleus	31.63	28.57
AT5G47670.3	Thale cress	nucleus	30.7	28.21
AT5G23090.1	Thale cress	cytosol, nucleus, plastid	16.74	22.64
AT5G08190.1	Thale cress	cytosol, nucleus, plastid	16.74	22.09

Protein Annotations

Gene3D:1.10.20.10	MapMan:15.5.51.2	EntrezGene:815843	UniProt:A0A178VTX6	ProteinID:AAD22680.1	EMBL:AB493547
ProteinID:AEC06243.1	ArrayExpress:AT2G13570	EnsemblPlantsGene:AT2G13570	RefSeq:AT2G13570	TAIR:AT2G13570	RefSeq:AT2G13570-TAIR-G
EnsemblPlants:AT2G13570.1	TAIR:AT2G13570.1	EMBL:BT025276	UniProt:C0SV44	InterPro:CBFA_NFYB_domain	EMBL:DQ446491
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
GO:GO:0046982	InterPro:Histone-fold	InterPro:IPR009072	Symbol:NF-YB7	RefSeq:NP_178981.1	ProteinID:OAP09877.1
PFAM:PF00808	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0007611	PO:PO:0007616
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0025022
PO:PO:0025195	PO:PO:0025281	PRINTS:PR00615	ScanProsite:PS00685	PANTHER:PTHR11064	PANTHER:PTHR11064:SF9
UniProt:Q9SIT9	SUPFAM:SSF47113	InterPro:Transcrpt_fac_NFYB/HAP3_CS	UniParc:UPI000009F6CA	SEG:seg	:

Description

NFYB7Uncharacterized protein At2g13570 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV44]

Coordinates

chr2:-:5655391..5656518

Molecular Weight (calculated)

24620.3 Da

IEP (calculated)

6.417

GRAVY (calculated)

-1.147

Length

215 amino acids

Sequence
(BLAST)

001: MTEESPEEDH GSPGVAETNP GSPSSKTNNN NNNNKEQDRF LPIANVGRIM KKVLPGNGKI SKDAKETVQE CVSEFISFVT GEASDKCQRE KRKTINGDDI
101: IWAITTLGFE DYVAPLKVYL CKYRDTEGEK VNSPKQQQQR QQQQQIQQQN HHNYQFQEQD QNNNNMSCTS YISHHHPSPF LPVDHQPFPN IAFSPKSLQK
201: QFPQQHDNNI DSIHW

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.