CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003550.1-P	Field mustard	extracellular	15.92	62.9
VIT_09s0002g07030.t01	Wine grape	plasma membrane	61.22	62.37
Solyc12g042760.1.1	Tomato	plasma membrane	56.73	58.04
PGSC0003DMT400073695	Potato	cytosol	54.08	57.73
CDY54307	Canola	extracellular	55.71	55.49
CDY57686	Canola	extracellular	56.12	55.33
Bra003549.1-P	Field mustard	extracellular	55.51	54.73
AT1G80080.1	Thale cress	plasma membrane	54.29	53.63
GSMUA_Achr7P24750_001	Banana	cytosol	46.73	47.71
TraesCS2A01G357100.1	Wheat	plasma membrane	42.86	43.3
TraesCS2B01G376300.1	Wheat	extracellular	42.86	42.94
TraesCS2D01G355900.1	Wheat	plasma membrane	42.04	42.04
Os01t0623000-00	Rice	plasma membrane	42.24	41.9
HORVU2Hr1G086860.1	Barley	plasma membrane	42.04	41.78
EES01095	Sorghum	extracellular, plasma membrane, vacuole	42.65	41.47
Zm00001d044182_P001	Maize	vacuole	41.84	40.51
KRG92006	Soybean	extracellular, plasma membrane	27.76	28.51
KRH34777	Soybean	extracellular, vacuole	27.55	28.18
KRH70637	Soybean	extracellular, golgi	26.73	28.11
KRH75532	Soybean	extracellular, plasma membrane	26.33	27.74
KRH56709	Soybean	extracellular, plasma membrane	26.53	27.25
KRH03836	Soybean	extracellular, plasma membrane, vacuole	25.51	26.37
KRH32220	Soybean	extracellular, plasma membrane, vacuole	23.67	26.01
KRH19593	Soybean	extracellular, plasma membrane	21.63	24.77
KRH58668	Soybean	cytosol	10.0	16.07
KRH42561	Soybean	cytosol	13.06	14.51
KRH11174	Soybean	plasma membrane	13.06	13.5
KRH21079	Soybean	extracellular	13.67	13.19

Protein Annotations

MapMan:11.10.2.3.3	Gene3D:3.80.10.10	UniProt:A0A0R0GYX9	EMBL:ACUP02008474	EnsemblPlantsGene:GLYMA_13G365900	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR001611
InterPro:IPR032675	EnsemblPlants:KRH23585	ProteinID:KRH23585	ProteinID:KRH23585.1	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_4	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF12799	PFAM:PF13855	PRINTS:PR00019	PFscan:PS51450
PANTHER:PTHR44325	SMART:SM00369	SUPFAM:SSF52058	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0006EDE1BC
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:45184035..45185582

Molecular Weight (calculated)

54014.5 Da

IEP (calculated)

8.064

GRAVY (calculated)

0.006

Length

490 amino acids

Sequence
(BLAST)

001: MSPCLHLLLQ VLCCTLILPH AVVTAFTVIM SDSGVPSTLV DGPQTGFSMN QDGSRTDKRE QEAVYDIMRA TGNAWATDIP DVCRGRWHGI ECMPDKDDVF
101: HVVSLSFGAL SDDTAFPTCD PTRSFISASI ANLPHLKTLF FYRCFSYNPQ PIPSFLGLLG PSLQTLVLRE NGHVGPIPVE LGNLTRLRVL DLHKNNLNGS
201: IPISLGRITG LRSLDLSGNK ITGSIPGFAF PSLNVLDLSQ NLLMGSIPST FWDCYSLIKL DFSRNRLVGP LPEKPMGLKD LMLLDLSYNR IQGPFPGSLK
301: SLSSLQGTPW VRRAYPMMGS NGMKALMILV LSNMNWHGPV PESLGKLRNL RVLHLDGNHF NGSIPKSFRD LRSLSELRLN DNGLIGSVPF DREMVWRMKR
401: KLRLNNNSGL CYDASSGLGD SMDSTFDLGI SLCDTSNPGS VRTVQHLSAT QKLMPVTSDA VEALTSWSLG LTTFVLFFYN FVVSCKYSYQ

Best Arabidopsis Sequence Match ( AT1G80080.1 )
(BLAST)

001: MARYEFFRQI FIVLSIVSPL VRSFTVITSD STAPSALIDG PQTGFTMTND GARTEPDEQD AVYDIMRATG NDWAAAIPDV CRGRWHGIEC MPDQDNVYHV
101: VSLSFGALSD DTAFPTCDPQ RSYVSESLTR LKHLKALFFY RCLGRAPQRI PAFLGRLGSS LQTLVLRENG FLGPIPDELG NLTNLKVLDL HKNHLNGSIP
201: LSFNRFSGLR SLDLSGNRLT GSIPGFVLPA LSVLDLNQNL LTGPVPPTLT SCGSLIKIDL SRNRVTGPIP ESINRLNQLV LLDLSYNRLS GPFPSSLQGL
301: NSLQALMLKG NTKFSTTIPE NAFKGLKNLM ILVLSNTNIQ GSIPKSLTRL NSLRVLHLEG NNLTGEIPLE FRDVKHLSEL RLNDNSLTGP VPFERDTVWR
401: MRRKLRLYNN AGLCVNRDSD LDDAFGSKSG STVRLCDAET SRPAPSGTVQ HLSREEDGAL PDGATDVSST SKSLGFSYLS AFFLVFPNFI FMLISS

Arabidopsis Description

TMMTMM [Source:UniProtKB/TrEMBL;Acc:A0A178WJY8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.