CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32220	Soybean	extracellular, plasma membrane, vacuole	67.76	65.02
PGSC0003DMT400026717	Potato	cytosol	45.56	46.1
Solyc09g072630.2.1	Tomato	extracellular	44.16	43.65
CDY35199	Canola	extracellular, plasma membrane	43.93	42.63
CDY38378	Canola	extracellular	44.16	42.57
Bra011040.1-P	Field mustard	extracellular, plasma membrane	43.46	42.18
VIT_07s0005g03750.t01	Wine grape	plasma membrane	45.56	41.94
AT4G28560.1	Thale cress	extracellular, vacuole	41.82	39.78
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	40.42	37.45
Os06t0627500-01	Rice	extracellular	29.67	28.67
KRG92006	Soybean	extracellular, plasma membrane	25.47	22.85
KRH70637	Soybean	extracellular, golgi	24.77	22.75
KRH34777	Soybean	extracellular, vacuole	25.23	22.55
KRH03836	Soybean	extracellular, plasma membrane, vacuole	24.77	22.36
KRH56709	Soybean	extracellular, plasma membrane	24.77	22.22
KRH75532	Soybean	extracellular, plasma membrane	23.83	21.94
KRH23585	Soybean	extracellular, plasma membrane, vacuole	24.77	21.63
KRH42561	Soybean	cytosol	14.72	14.29
KRH58668	Soybean	cytosol	9.58	13.44
KRH11174	Soybean	plasma membrane	13.55	12.24
KRH21079	Soybean	extracellular	13.79	11.61

Protein Annotations

EMBL:ACUP02008191	EnsemblPlants:KRH19593	EnsemblPlantsGene:GLYMA_13G125200	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44325
PANTHER:PTHR44325:SF3	PFAM:PF13855	ProteinID:KRH19593	ProteinID:KRH19593.1	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF52058	UniParc:UPI0006ED97A1	UniProt:A0A0R0GVT2	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr13:+:23862001..23863468

Molecular Weight (calculated)

46917.2 Da

IEP (calculated)

5.219

GRAVY (calculated)

0.062

Length

428 amino acids

Sequence
(BLAST)

001: MGLVLWTMMF SFVVTSTFFS LSHQQPPLDS SEQESLYEVL HSLNPSVPWR TLFPDDLCLS APHGVVCDFP TQQNETPHIV ELSFGYVSDE TPNPPCSPNA
101: TLNPLIFTSF PYLSNSSSTI ASTNPSFSSF SPSSLEELLI LIGNAFHGEI PFYIGGFLNL EEVTLSRNNL SGEIPSSLGL LRNLKVLDLS GNKFEQCLPH
201: SLGNLSHLLK LDLSFNGFSC RIPESLRGLQ SLHFLDLSFN RFGNFGVPLF LREIPTLKEV YLSGNFLSGV IPEIWENLGG VEKLGFSEMG LVGNIPASMG
301: VHLKKLTYLG LDNNKLDGPV PYGLLEYASE INLENNKLSG RVEFSTTKVG QKVKLAGNTG LCVDNNKVGC KRRSGDGVLG QQLKACKKTD VVPDDAVVFS
401: GASSLLRFDS LAGVLFVFTG FRWFGYYV

Best Arabidopsis Sequence Match ( AT4G28560.1 )
(BLAST)

001: MASFTNLSLL LLFLFTATLI TSQQSDDDEN ASPQLALDPS EQEAVYRVLD SVNSAISWRT IFPDDICASP PDGVVCDNLY ASQNGVATSV HVTEFHLGYL
101: SDYTQNPPCS SNATLDPLLF TAFKHLRKLF FYKCFTDARA SLPLTVPEDF GSVLEELVFI ENPSLVGEIG AMIGNFTKLR RLVLTGNGFH GSIPGQIGDL
201: VSLEEITLSR NSLTGGFPAN ATSRLKNLKV LDFSHNFING NAPDSIGDLT ELLKLDLSFN EFTGEVPSGV GNLKKLVFLD LSYNRFGNFG VPLFLAEMSS
301: LREVHLSGNK LGGRIPAIWK NLEGISGIGF SRMGLEGNIP ASMGSSLKNL CFLALDNNNL DGQIPEEFGF LDSAREINLE NNNLTGKAPF SDSFRDRIGK
401: KLKLSGNVNL QVKNSDPHLA GRALYSSARK VLPLIYFPAT LLALYISITQ

Arabidopsis Description

RIC7ROP-interactive CRIB motif-containing protein 7 [Source:UniProtKB/TrEMBL;Acc:F4JLB7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.