Factsheet for Os06t0627500-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g072630.2.1	Tomato	extracellular	34.09	34.87
PGSC0003DMT400026717	Potato	cytosol	32.51	34.04
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	34.54	33.12
CDY35199	Canola	extracellular, plasma membrane	32.73	32.88
Bra011040.1-P	Field mustard	extracellular, plasma membrane	32.51	32.65
CDY38378	Canola	extracellular	32.05	31.98
VIT_07s0005g03750.t01	Wine grape	plasma membrane	32.28	30.75
KRH32220	Soybean	extracellular, plasma membrane, vacuole	30.7	30.49
AT4G28560.1	Thale cress	extracellular, vacuole	30.25	29.78
KRH19593	Soybean	extracellular, plasma membrane	28.67	29.67
Os01t0623000-00	Rice	plasma membrane	28.44	25.51
Os01t0110800-01	Rice	plasma membrane	24.83	24.44
Os01t0729400-01	Rice	plasma membrane, vacuole	13.09	12.78
Os05t0530701-01	Rice	plasma membrane	12.42	11.68

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:4341578	EMBL:AK101725	ProteinID:BAD37387.1	ProteinID:BAD37712.1
ProteinID:BAF20035.1	ProteinID:BAS98713.1	ncoils:Coil	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0008150	GO:GO:0009653
GO:GO:0009856	GO:GO:0009860	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049
GO:GO:0016324	GO:GO:0030154	GO:GO:0040007	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	EnsemblPlantsGene:Os06g0627500	EnsemblPlants:Os06t0627500-01	PFAM:PF13855	PRINTS:PR00019	PANTHER:PTHR44325
PANTHER:PTHR44325:SF3	UniProt:Q67VV7	SUPFAM:SSF52058	SignalP:SignalP-noTM	UniParc:UPI000042628B	RefSeq:XP_015642095.1
SEG:seg	:	:	:	:	:

Description

Leucine-rich repeat, plant specific containing protein. (Os06t0627500-01)

Coordinates

chr6:-:25347186..25348647

Molecular Weight (calculated)

45392.6 Da

IEP (calculated)

8.281

GRAVY (calculated)

0.374

Length

443 amino acids

Sequence
(BLAST)

001: MRMILGRLLV VAVLAAAAAA AESEPRLPAA EQEGVYAVLE AVNPGFPWRA SFPDDLCLAG PHGVSCDDDD GGNASHVVGI SLGYVSDFSA NPSCAAPSAA
101: TLLTSGLLAA SFPRLRSLFV YGCFVGDDDA RPLPPLPWRL PPTLQDLVLV NNPALTGRLA ISAASLPLLR RLVVASSGLS GDLPSTPFPR LEQLVLSGSR
201: FAGRIPSALV QGLANVKILD LSSNLLAGGI PRAIGGLTQL VKLDLSSNTL AGPIPGELGG LASLELLDLS NNRLTGGVPA ALRGMTAIRE MYLSGNRRLG
301: GRVPADMFAG LKGISAVGLS DAGLTGTIPA SLGESLRNVT YLGLDGNLLE GEVPPALAKM AGRVRLHGNR AVCISPEFLA GAPRPRIAGV PSCNATQAAP
401: VTRRPVVMPV PLASAEKPAA AAPPPPMRIG SCVVVAMLLL MLS

Best Arabidopsis Sequence Match ( AT4G28560.1 )
(BLAST)

001: MASFTNLSLL LLFLFTATLI TSQQSDDDEN ASPQLALDPS EQEAVYRVLD SVNSAISWRT IFPDDICASP PDGVVCDNLY ASQNGVATSV HVTEFHLGYL
101: SDYTQNPPCS SNATLDPLLF TAFKHLRKLF FYKCFTDARA SLPLTVPEDF GSVLEELVFI ENPSLVGEIG AMIGNFTKLR RLVLTGNGFH GSIPGQIGDL
201: VSLEEITLSR NSLTGGFPAN ATSRLKNLKV LDFSHNFING NAPDSIGDLT ELLKLDLSFN EFTGEVPSGV GNLKKLVFLD LSYNRFGNFG VPLFLAEMSS
301: LREVHLSGNK LGGRIPAIWK NLEGISGIGF SRMGLEGNIP ASMGSSLKNL CFLALDNNNL DGQIPEEFGF LDSAREINLE NNNLTGKAPF SDSFRDRIGK
401: KLKLSGNVNL QVKNSDPHLA GRALYSSARK VLPLIYFPAT LLALYISITQ

Arabidopsis Description

RIC7ROP-interactive CRIB motif-containing protein 7 [Source:UniProtKB/TrEMBL;Acc:F4JLB7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.