Factsheet for Os01t0729400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	extracellular, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G282900.1	Wheat	extracellular, plasma membrane	77.31	78.17
TraesCS3B01G316600.1	Wheat	extracellular, plasma membrane	78.63	77.95
TraesCS3A01G282900.1	Wheat	extracellular, plasma membrane	76.21	76.72
HORVU3Hr1G069160.1	Barley	extracellular, plasma membrane	77.31	76.64
Zm00001d011757_P001	Maize	extracellular, plasma membrane	72.03	72.99
EES01405	Sorghum	extracellular, plasma membrane	74.67	71.52
Os05t0530701-01	Rice	plasma membrane	66.96	64.54
GSMUA_Achr4P15510_001	Banana	cytosol	28.41	30.5
VIT_12s0142g00620.t01	Wine grape	cytosol	27.31	29.04
Solyc10g007830.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	27.09	27.83
Bra004719.1-P	Field mustard	extracellular, plasma membrane, vacuole	26.87	26.87
AT2G42800.1	Thale cress	vacuole	27.31	26.84
CDY50822	Canola	extracellular, plasma membrane, vacuole	24.67	26.17
PGSC0003DMT400054822	Potato	plasma membrane	26.21	26.15
CDX79853	Canola	extracellular, plasma membrane, vacuole	24.45	25.93
Os01t0623000-00	Rice	plasma membrane	19.82	18.22
Os01t0110800-01	Rice	plasma membrane	16.52	16.67
Os06t0627500-01	Rice	extracellular	12.78	13.09

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:4323927	ProteinID:BAF06048.2	ProteinID:BAS74161.1	ProteinID:EAZ13420.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
EnsemblPlantsGene:Os01g0729400	EnsemblPlants:Os01t0729400-01	PFAM:PF00560	PFAM:PF13855	PRINTS:PR00019	PANTHER:PTHR45183
PANTHER:PTHR45183:SF3	UniProt:Q0JJN0	SMART:SM00369	SUPFAM:SSF52058	SignalP:SignalP-noTM	UniParc:UPI0000F1727D
RefSeq:XP_015614693.1	SEG:seg	:	:	:	:

Description

Similar to Too many mouths protein. (Os01t0729400-01)

Coordinates

chr1:+:30407036..30408554

Molecular Weight (calculated)

46886.6 Da

IEP (calculated)

5.357

GRAVY (calculated)

0.256

Length

454 amino acids

Sequence
(BLAST)

001: MAASVAVFVC LLSVAAAAAS MDPAEREALF LVMEAVSSDR DWRSESPDPC GAPWPGLECK PAAGDAAAAL LRVTRLDFGV EPNPSCKDTA AFPPLVFSSL
101: PHLQSLFFVG CFKNPAANTS LVLPPAANLS TSSLQQLSIR ANPSLSGVMP PQLATLRSLQ VLTISQNGLI RGEIPQGIGE LTSLVHLDLS YNSLTGPVPS
201: EISELKSLVG LDLSYNSLSG AIPSRIGELR QLQKLDLSSN NLTGGIPVSI ANLSSLTFLA LSSNGLSGHF PPGLSGLRNL QCLIMDNNPM NVPLPSELGG
301: LPRLQELRLA GSGYSGQIPA AFGQLASLTT LSLEDNNLTG EIPPVLTRLT RMYHLNLSNN GLGGAVPFDG AFLRRLGQNL DLSGNAGLCL DDRMVVRGVG
401: VGVGACHAGG GGDGPLAPGG VTGAAATVRG SVDGYPFRLL GHACLVVACL VSLN

Best Arabidopsis Sequence Match ( AT2G42800.1 )
(BLAST)

001: MTMKRALPSP SSLLFFFLLI TPLFLCQENR VSASMPPSES ETLFKIMESM SSDQQWRQSH PNPCAPGSSW PGIECKTGPD HLSHVSRLDF GSAPNPSCKS
101: SASFPSSIFT LPFLQSVFFF NCFTHFPTTI MFPIKLIPNS SLQQLSLRSN PSLSGQIPPR ISSLKSLQIL TLSQNRLTGD IPPAIFSLKS LVHLDLSYNK
201: LTGKIPLQLG NLNNLVGLDL SYNSLTGTIP PTISQLGMLQ KLDLSSNSLF GRIPEGVEKL RSLSFMALSN NKLKGAFPKG ISNLQSLQYF IMDNNPMFVA
301: LPVELGFLPK LQELQLENSG YSGVIPESYT KLTNLSSLSL ANNRLTGEIP SGFESLPHVF HLNLSRNLLI GVVPFDSSFL RRLGKNLDLS GNRGLCLNPE
401: DEFSVVKTGV DVCGKNVSSG GGLSVHSSKK KSQASRYYRS CFFANALFPF ALFLGLHQRW VL

Arabidopsis Description

AtRLP29RLP29 [Source:UniProtKB/TrEMBL;Acc:A0A178VT48]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.