Factsheet for Os01t0110800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

plasma membrane: 18260611
plasma membrane: 19502382

msms PMID: 19502382 doi

M Fujiwara, S Hamada, M Hiratsuka, Y Fukao, T Kawasaki, K Shimamoto

Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG32099	Sorghum	plasma membrane	72.0	67.22
KXG32097	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	70.44	66.32
TraesCS3D01G072400.2	Wheat	extracellular, plasma membrane	66.67	61.48
Zm00001d040130_P001	Maize	mitochondrion	72.0	61.02
HORVU3Hr1G013160.4	Barley	vacuole	65.33	60.49
TraesCS3B01G086700.2	Wheat	extracellular, plasma membrane, vacuole	65.56	60.2
TraesCS3D01G072300.2	Wheat	endoplasmic reticulum, plasma membrane, vacuole	64.0	59.75
TraesCS3A01G072700.2	Wheat	extracellular	64.89	59.59
TraesCS3A01G072600.2	Wheat	extracellular	64.22	58.86
GSMUA_Achr8P03860_001	Banana	cytosol	45.78	57.87
KRH70637	Soybean	extracellular, golgi	49.33	47.64
KRH75532	Soybean	extracellular, plasma membrane	48.89	47.31
AT1G13230.1	Thale cress	extracellular	44.22	46.93
Bra004336.1-P	Field mustard	extracellular, golgi	44.67	46.64
AT1G68780.1	Thale cress	extracellular, golgi	44.44	46.3
CDY19386	Canola	cytosol	41.78	46.08
VIT_01s0011g02800.t01	Wine grape	extracellular	49.33	45.96
KRG92006	Soybean	extracellular, plasma membrane	48.67	45.91
CDX97999	Canola	extracellular	42.67	45.71
CDX95990	Canola	extracellular, vacuole	43.78	45.71
Solyc05g009990.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	47.33	45.42
PGSC0003DMT400002145	Potato	extracellular	47.11	45.4
CDY33598	Canola	extracellular, golgi	43.33	45.24
KRH34777	Soybean	extracellular, vacuole	47.56	44.68
CDY20429	Canola	cytosol	14.0	43.75
Solyc06g069290.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	44.0	42.58
PGSC0003DMT400010384	Potato	cytosol	42.89	42.42
KRH03836	Soybean	extracellular, plasma membrane, vacuole	44.0	41.77
KRH56709	Soybean	extracellular, plasma membrane	44.0	41.51
AT3G25670.1	Thale cress	extracellular	43.11	40.84
HORVU1Hr1G008420.1	Barley	extracellular	12.22	40.74
CDX83542	Canola	extracellular, plasma membrane, vacuole	41.56	39.53
Bra025154.1-P	Field mustard	extracellular, plasma membrane, vacuole	41.33	39.24
CDY13577	Canola	vacuole	41.33	39.24
Os01t0623000-00	Rice	plasma membrane	30.22	27.53
Os06t0627500-01	Rice	extracellular	24.44	24.83
Os05t0530701-01	Rice	plasma membrane	18.67	17.83
Os01t0729400-01	Rice	plasma membrane, vacuole	16.67	16.52
Bra019819.1-P	Field mustard	nucleus	42.22	12.64

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:4326139	EMBL:AK065190	ProteinID:BAD44939.1	ProteinID:BAF03714.1
ProteinID:BAS70013.1	ProteinID:EEE53735.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	EnsemblPlantsGene:Os01g0110800	EnsemblPlants:Os01t0110800-01	PFAM:PF00560
PFAM:PF13855	PANTHER:PTHR44325	PANTHER:PTHR44325:SF1	UniProt:Q657S8	SUPFAM:SSF52058	SignalP:SignalP-noTM
UniParc:UPI000043A128	RefSeq:XP_015634738.1	SEG:seg	:	:	:

Description

Leucine-rich repeat, plant specific containing protein. (Os01t0110800-01)

Coordinates

chr1:-:576495..579569

Molecular Weight (calculated)

47545.5 Da

IEP (calculated)

8.389

GRAVY (calculated)

0.130

Length

450 amino acids

Sequence
(BLAST)

001: MRQPQSRKLL QLQALSLLLF IIALHSRLHG CSGQGEAADG SASTAAAPME EKEKRALYAA IEGFVGKGWN GSALYPDPCG WSPIQGVSCD LFNGLWYPTV
101: MSIGPVLDNS LRCSADAKFS PQLFDLKRLK TLSFYSCFPA TNPTPIPATS WDKLAGSLET LEFRTNPGLT GPIPASLGRL SSLQSLVFVE NNLTGAVPAE
201: LGSLVRLRRL VLSGNGLSGQ IPASLGGLKG LLKMDLSNNL LQGSLPPELA GLGSLTLLDL RNNSFTGGLP SFLQGMASLQ DLLLSNNPLG GSLGQLGWER
301: LRGLATLDLS NLGLVGAIPE SMAALTRLRF LALDHNRLTG DVPARLAELP NIGALYLNGN NLTGTLQFSP AFYQRMGRRF ASWDNPGLCY SNAAVDAAHA
401: PPGVTVCKVA GGVGDGRKPE ASSSLMATSS ASNLINGFCF FLWMVATSLL

Best Arabidopsis Sequence Match ( AT1G68780.1 )
(BLAST)

001: MKMLRLRKKQ HLVFLLCVWC LVVDWSKAET EESDGSPMEK TEQAALYSTI QGFVGESWNG SYLYPDPCGW TPIQGVTCDI YDELWYVTAL SFGTMKDNSL
101: ACSESPVIRP QLFELKHLKS LSLFNCFTTP NRYLASISDE KWLDLSKSLE RLEIRSNPGL IGELPSVITN LTNLQSLVVL ENKLTGPLPV NLAKLTRLRR
201: LVLSGNRFTG RIPEVYGLTG LLILDVSRNF LSGALPLSVG GLYSLLKLDL SNNYLEGKLP RELESLKNLT LLDLRNNRLS GGLSKEIQEM TSLVELVLSN
301: NRLAGDLTGI KWRNLKNLVV LDLSNTGLKG EIPGSILELK KLRFLGLSNN NLGGKLIPQM ETEMPSLSAL YVNGNNISGE LEFSRYFYER MGRRLGVWGN
401: PNLCYNGDET KNLSDHVPFG VNQCKRIKAD KY

Arabidopsis Description

At1g68780 [Source:UniProtKB/TrEMBL;Acc:Q9CA41]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.