Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 6
  • golgi 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG32097 Sorghum endoplasmic reticulum, extracellular, plasma membrane 95.02 95.82
Zm00001d040130_P001 Maize mitochondrion 81.12 73.63
Os01t0110800-01 Rice plasma membrane 67.22 72.0
TraesCS3D01G072400.2 Wheat extracellular, plasma membrane 63.9 63.11
HORVU3Hr1G013160.4 Barley vacuole 63.49 62.96
TraesCS3A01G072700.2 Wheat extracellular 62.86 61.84
TraesCS3B01G086700.2 Wheat extracellular, plasma membrane, vacuole 62.45 61.43
TraesCS3D01G072300.2 Wheat endoplasmic reticulum, plasma membrane, vacuole 61.41 61.41
TraesCS3A01G072600.2 Wheat extracellular 62.03 60.9
GSMUA_Achr8P03860_001 Banana cytosol 40.25 54.49
KRH70637 Soybean extracellular, golgi 44.61 46.14
KRH75532 Soybean extracellular, plasma membrane 44.19 45.81
AT1G13230.1 Thale cress extracellular 40.04 45.52
CDY19386 Canola cytosol 38.38 45.34
Solyc05g009990.2.1 Tomato endoplasmic reticulum, golgi, plasma membrane 43.98 45.2
AT1G68780.1 Thale cress extracellular, golgi 40.46 45.14
CDX97999 Canola extracellular 39.21 45.0
PGSC0003DMT400002145 Potato extracellular 43.57 44.97
KRG92006 Soybean extracellular, plasma membrane 44.19 44.65
CDY20429 Canola cytosol 13.28 44.44
CDX95990 Canola extracellular, vacuole 39.63 44.32
Bra004336.1-P Field mustard extracellular, golgi 39.63 44.32
KRH34777 Soybean extracellular, vacuole 43.57 43.84
CDY33598 Canola extracellular, golgi 39.0 43.62
VIT_01s0011g02800.t01 Wine grape extracellular 43.57 43.48
HORVU1Hr1G008420.1 Barley extracellular 11.83 42.22
KRH03836 Soybean extracellular, plasma membrane, vacuole 41.49 42.19
KRH56709 Soybean extracellular, plasma membrane 41.49 41.93
CDX83542 Canola extracellular, plasma membrane, vacuole 40.66 41.44
PGSC0003DMT400010384 Potato cytosol 38.8 41.1
Bra025154.1-P Field mustard extracellular, plasma membrane, vacuole 40.25 40.93
CDY13577 Canola vacuole 40.25 40.93
Solyc06g069290.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 39.42 40.86
AT3G25670.1 Thale cress extracellular 39.21 39.79
EES01095 Sorghum extracellular, plasma membrane, vacuole 29.88 28.57
EES01405 Sorghum extracellular, plasma membrane 17.43 17.72
EER93755 Sorghum extracellular, plasma membrane 17.43 17.57
EES19861 Sorghum plastid 16.8 17.09
Bra019819.1-P Field mustard nucleus 39.21 12.57
Protein Annotations
EnsemblPlants:KXG32099EnsemblPlantsGene:SORBI_3003G100400Gene3D:3.80.10.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR001611InterPro:IPR032675InterPro:LRR_dom_sfInterPro:Leu-rich_rptPANTHER:PTHR44325PANTHER:PTHR44325:SF1
PFAM:PF13855ProteinID:KXG32099ProteinID:KXG32099.1SEG:segSignalP:SignalP-noTMSUPFAM:SSF52058
TMHMM:TMhelixUniParc:UPI00081AE5A6UniProt:A0A1B6Q2E8MapMan:35.1::
Description
hypothetical protein
Coordinates
chr3:-:8828771..8831214
Molecular Weight (calculated)
49886.0 Da
IEP (calculated)
5.050
GRAVY (calculated)
0.153
Length
482 amino acids
Sequence
(BLAST)
001: MRPAGGCCRR GGGLLVLGLA LSLSAALLLR GCAGQQAEDD GSADAPAAAA AAATAPMEEK ERRALYAAIE SFVGKGWNGS GLYPDPCGWS PIQGVSCDLF
101: NGLWYPTVMS IGPVLDNSLQ CAPDAKFSPQ LFDLRRLRTL SFYSCFPASN PTAIPTAGWE KLSGTLETLE FRTNPGLTGG IPPSLGRLAS LQSLVLVENN
201: LTGPVPAELG ALSRLRRLVL SGNGLSGPIP ATLGGLTGLL KMDLSNNLLQ GSIPPELAGL KSLTLLDLRN NSLTGGLPQF VQCMASLQDL LLSNNPQLGG
301: ALPQSGWETL AANLATLDLS NVGLVGAIPA SMAKLTGLRF LALDHNRLTG AVPAELDQLP SIGALYLNGN NLTGPLQFSP GFYQRMGRRF ASWDNPGLCY
401: NIAAVDAAHA PSGVVVCKDL QEPSVARDGD GEEEGGRKPE ASSSLVASSS SGGFVGSVGG HWYLVVVQGM AAAVLGLLSQ LL
Best Arabidopsis Sequence Match ( AT1G68780.1 )
(BLAST)
001: MKMLRLRKKQ HLVFLLCVWC LVVDWSKAET EESDGSPMEK TEQAALYSTI QGFVGESWNG SYLYPDPCGW TPIQGVTCDI YDELWYVTAL SFGTMKDNSL
101: ACSESPVIRP QLFELKHLKS LSLFNCFTTP NRYLASISDE KWLDLSKSLE RLEIRSNPGL IGELPSVITN LTNLQSLVVL ENKLTGPLPV NLAKLTRLRR
201: LVLSGNRFTG RIPEVYGLTG LLILDVSRNF LSGALPLSVG GLYSLLKLDL SNNYLEGKLP RELESLKNLT LLDLRNNRLS GGLSKEIQEM TSLVELVLSN
301: NRLAGDLTGI KWRNLKNLVV LDLSNTGLKG EIPGSILELK KLRFLGLSNN NLGGKLIPQM ETEMPSLSAL YVNGNNISGE LEFSRYFYER MGRRLGVWGN
401: PNLCYNGDET KNLSDHVPFG VNQCKRIKAD KY
Arabidopsis Description
At1g68780 [Source:UniProtKB/TrEMBL;Acc:Q9CA41]
SUBAcon: [golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.