Factsheet for TraesCS3B01G086700.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G072600.2	Wheat	extracellular	93.27	93.08
TraesCS3D01G072300.2	Wheat	endoplasmic reticulum, plasma membrane, vacuole	89.39	90.87
TraesCS3A01G072700.2	Wheat	extracellular	84.08	84.08
HORVU3Hr1G013160.4	Barley	vacuole	83.06	83.74
Os01t0110800-01	Rice	plasma membrane	60.2	65.56
KXG32097	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	61.22	62.76
KXG32099	Sorghum	plasma membrane	61.43	62.45
Zm00001d040130_P001	Maize	mitochondrion	66.12	61.02
GSMUA_Achr8P03860_001	Banana	cytosol	42.65	58.71
HORVU1Hr1G008420.1	Barley	extracellular	13.88	50.37
AT1G13230.1	Thale cress	extracellular	39.39	45.52
AT1G68780.1	Thale cress	extracellular, golgi	40.0	45.37
CDY19386	Canola	cytosol	37.76	45.34
Solyc06g069290.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	42.86	45.16
KRH75532	Soybean	extracellular, plasma membrane	42.86	45.16
Bra004336.1-P	Field mustard	extracellular, golgi	39.59	45.01
KRH70637	Soybean	extracellular, golgi	42.65	44.85
Solyc05g009990.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	42.86	44.78
CDX97999	Canola	extracellular	38.37	44.76
PGSC0003DMT400002145	Potato	extracellular	42.65	44.75
PGSC0003DMT400010384	Potato	cytosol	41.22	44.4
CDX95990	Canola	extracellular, vacuole	38.98	44.32
VIT_01s0011g02800.t01	Wine grape	extracellular	43.47	44.1
CDY33598	Canola	extracellular, golgi	38.57	43.85
KRG92006	Soybean	extracellular, plasma membrane	42.24	43.4
KRH03836	Soybean	extracellular, plasma membrane, vacuole	41.02	42.41
AT3G25670.1	Thale cress	extracellular	41.02	42.32
KRH34777	Soybean	extracellular, vacuole	41.02	41.96
KRH56709	Soybean	extracellular, plasma membrane	40.61	41.72
CDX83542	Canola	extracellular, plasma membrane, vacuole	39.59	41.01
CDY13577	Canola	vacuole	39.59	40.93
Bra025154.1-P	Field mustard	extracellular, plasma membrane, vacuole	39.18	40.51
CDY20429	Canola	cytosol	11.02	37.5
TraesCS2B01G376300.1	Wheat	extracellular	29.39	29.45
TraesCS5B01G376600.1	Wheat	plasma membrane	15.71	16.81
TraesCS1B01G365000.1	Wheat	extracellular, vacuole	14.9	16.7
TraesCS3B01G316600.1	Wheat	extracellular, plasma membrane	15.51	16.59
Bra019819.1-P	Field mustard	nucleus	37.55	12.24

Protein Annotations

EnsemblPlants:TraesCS3B01G086700.2	EnsemblPlantsGene:TraesCS3B01G086700	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44325	PANTHER:PTHR44325:SF1
PFAM:PF00560	PFAM:PF13855	PFscan:PS51257	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:54994484..54997032

Molecular Weight (calculated)

50981.8 Da

IEP (calculated)

5.285

GRAVY (calculated)

0.137

Length

490 amino acids

Sequence
(BLAST)

001: MGRARGGRLL LVLAALFVAL LLLSGCAAEG EDEEGSPVAA AEEPEAPMED KEKAALYAAI GGFVGKAWNG SGLFPDPCGQ TPIQGVSCDL FNGLWHPTVV
101: SIGPVLDNSL QCAPDARFSP QLFDLRRLKS LTFYACFPAA NPTAIPAANW YRLAGTLETL EFRSNPGLAG AIPASLGRLA SLQSLVLVDN NLTGAVPPEL
201: GGLAKLRRLV LSGNGLSGPV PATLGNNNTQ LRRLDEPLLI VDMSKNSLTG SLPPSLGGLK GLLKMDLSNN RLDGRIPPEL AGLESLTLLD LRNNSLTGGL
301: PEFVLGMPAL QDLLLSSNPL LGGTLMQRGW EKMASLATLD LSNVGLGGAI PESMAAMPRL RFLALDHNRL SGTVPAKLAA LPSIGAMYLN GNNLTGALEF
401: SPAFYQRMGS RFASWDNPGL CAAEADGGAP TGVAVCKDAQ DPPRVGVRDR MDGGGGKPEA SSSLPASSSS FGLSGHKVAG LWCLVMVMVL

Best Arabidopsis Sequence Match ( AT3G25670.1 )
(BLAST)

001: MSWIHLVLFL CLTLLCCVTG ELSPEGTDDG APMEKTEQEA LYSAIQGFVG DSWNGSDLYP DPCGWTPIQG VSCDLYGDLW YVTDLTLGLV HENSLSCATS
101: LEIKPQLFKL KHLKSLTFFN CFTSPIRIPK EDWINLASNL ESLEFRSNPG LIGELPETIG SLTKLKSLVV LENGFNGKLP TRICNLTRLK RLVLAGNLFT
201: GTIPDCFNGF KDLLILDMSR NSFSGILPLS VGEMVSLLKL DLSNNQLEGR LPQEIGFLKN LTLLDLRNNR ISGGLFENIE KIPSLTDLVL SGNPMGSDDM
301: MGIKWENMGN LVILDLSKMG LRGEVPLGLT SLRRLRFLGL NDNNLTGTVP SKELETLPCL GALYINGNNL SGELRFSRKF YEKMGTRFKA SKNPNLCQDV
401: VSESRQYVVG LKSCMMEKAE DSLVIKQTWS NLKKEDESSS SMGVMVTRHV LLSNGFMWDL LLELSLILLL NLLVC

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4JA38]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.