Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • nucleus 1
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra025154.1-P Field mustard extracellular, plasma membrane, vacuole 97.89 97.68
CDY13577 Canola vacuole 97.67 97.47
AT3G25670.1 Thale cress extracellular 76.74 76.42
CDY19386 Canola cytosol 59.83 69.36
CDX97999 Canola extracellular 61.1 68.81
CDX95990 Canola extracellular, vacuole 49.05 53.83
GSMUA_Achr8P03860_001 Banana cytosol 40.38 53.65
CDY33598 Canola extracellular, golgi 47.78 52.44
KRH70637 Soybean extracellular, golgi 51.59 52.36
KRH75532 Soybean extracellular, plasma membrane 51.16 52.04
KRG92006 Soybean extracellular, plasma membrane 51.8 51.36
KRH34777 Soybean extracellular, vacuole 50.74 50.1
VIT_01s0011g02800.t01 Wine grape extracellular 51.16 50.1
PGSC0003DMT400002145 Potato extracellular 48.84 49.46
Solyc05g009990.2.1 Tomato endoplasmic reticulum, golgi, plasma membrane 47.36 47.76
GSMUA_Achr9P00780_001 Banana cytosol 44.82 47.53
Solyc06g069290.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 45.45 46.24
PGSC0003DMT400010384 Potato cytosol 44.4 46.15
GSMUA_Achr10P... Banana cytosol 35.31 45.26
GSMUA_AchrUn_... Banana cytosol 35.31 45.14
KRH56709 Soybean extracellular, plasma membrane 44.82 44.44
KRH03836 Soybean extracellular, plasma membrane, vacuole 43.76 43.67
CDY20429 Canola cytosol 12.9 42.36
Os01t0110800-01 Rice plasma membrane 39.53 41.56
KXG32097 Sorghum endoplasmic reticulum, extracellular, plasma membrane 41.44 41.0
TraesCS3D01G072400.2 Wheat extracellular, plasma membrane 42.07 40.78
KXG32099 Sorghum plasma membrane 41.44 40.66
TraesCS3D01G072300.2 Wheat endoplasmic reticulum, plasma membrane, vacuole 41.23 40.46
TraesCS3A01G072700.2 Wheat extracellular 41.23 39.8
HORVU3Hr1G013160.4 Barley vacuole 40.8 39.71
TraesCS3B01G086700.2 Wheat extracellular, plasma membrane, vacuole 41.01 39.59
TraesCS3A01G072600.2 Wheat extracellular 40.8 39.31
Zm00001d040130_P001 Maize mitochondrion 43.13 38.42
HORVU1Hr1G008420.1 Barley extracellular 9.51 33.33
CDY35199 Canola extracellular, plasma membrane 29.18 31.29
CDY38378 Canola extracellular 29.18 31.08
CDX79853 Canola extracellular, plasma membrane, vacuole 28.12 31.07
CDY50822 Canola extracellular, plasma membrane, vacuole 27.91 30.84
CDY54307 Canola extracellular 29.39 28.25
CDY57686 Canola extracellular 28.96 27.57
Protein Annotations
EnsemblPlants:CDX83542EnsemblPlantsGene:GSBRNA2T00139161001Gene3D:3.80.10.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR001611InterPro:IPR032675InterPro:LRR_dom_sfInterPro:Leu-rich_rptPANTHER:PTHR44325PANTHER:PTHR44325:SF1
PFAM:PF13855ProteinID:CDX83542ProteinID:CDX83542.1SEG:segSignalP:SignalP-noTMSUPFAM:SSF52058
UniParc:UPI0004EE09E0MapMan:35.1::::
Description
BnaC07g22820D
Coordinates
chrLK031833:-:379562..381576
Molecular Weight (calculated)
52499.8 Da
IEP (calculated)
5.847
GRAVY (calculated)
-0.004
Length
473 amino acids
Sequence
(BLAST)
001: MSWIHSVLFL FLVFRWCIAG ESSSPEVTDD GAPMEISERE ALYSTIQGFV GDSWNGSDLY PDPCGWTPIQ GVSCDLYDDL WYVTELTLGL VHENSLACAA
101: SLEIKPQLFK LKHLKSLSFV KCFTSSLTIS KEDWISLGSN LESLEFRSNP GLIGELPETF GSLTNLKSLV VLENGFNGKL PTRLCNLSSL KRLVLAGNLF
201: TGTIPDCFNG FKNLLILDLS RNSFSGTLPS TIGEMVSLLK LDLSNNQLEG KLPQGIGFLK NLTLLDVRNN RISGGFSQNV EKIRSLTDLV LSGNPMDIDD
301: MMGKWENMGS LVVLDLSKMG LRGDIPYGLT KLKRLRFLGL NDNELTGTVP SKELETLPYL GALYIHGNNL TGELRFSTKF YEKMGTRFKA SKNPNLCQYD
401: IVSESRSYVP PLGLKPCSKM KKTEGDLVIL QTLRNLKKED SSSSMSLMIT RRVLSNGLTW DLLLELSLIV LLI
Best Arabidopsis Sequence Match ( AT3G25670.1 )
(BLAST)
001: MSWIHLVLFL CLTLLCCVTG ELSPEGTDDG APMEKTEQEA LYSAIQGFVG DSWNGSDLYP DPCGWTPIQG VSCDLYGDLW YVTDLTLGLV HENSLSCATS
101: LEIKPQLFKL KHLKSLTFFN CFTSPIRIPK EDWINLASNL ESLEFRSNPG LIGELPETIG SLTKLKSLVV LENGFNGKLP TRICNLTRLK RLVLAGNLFT
201: GTIPDCFNGF KDLLILDMSR NSFSGILPLS VGEMVSLLKL DLSNNQLEGR LPQEIGFLKN LTLLDLRNNR ISGGLFENIE KIPSLTDLVL SGNPMGSDDM
301: MGIKWENMGN LVILDLSKMG LRGEVPLGLT SLRRLRFLGL NDNNLTGTVP SKELETLPCL GALYINGNNL SGELRFSRKF YEKMGTRFKA SKNPNLCQDV
401: VSESRQYVVG LKSCMMEKAE DSLVIKQTWS NLKKEDESSS SMGVMVTRHV LLSNGFMWDL LLELSLILLL NLLVC
Arabidopsis Description
Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4JA38]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.