Factsheet for HORVU3Hr1G013160.4

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 7
plasma membrane 5
golgi 5
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G072700.2	Wheat	extracellular	87.24	86.53
TraesCS3A01G072600.2	Wheat	extracellular	84.16	83.3
TraesCS3B01G086700.2	Wheat	extracellular, plasma membrane, vacuole	83.74	83.06
TraesCS3D01G072300.2	Wheat	endoplasmic reticulum, plasma membrane, vacuole	81.69	82.37
Os01t0110800-01	Rice	plasma membrane	60.49	65.33
KXG32097	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	62.96	64.02
KXG32099	Sorghum	plasma membrane	62.96	63.49
Zm00001d040130_P001	Maize	mitochondrion	66.87	61.21
GSMUA_Achr8P03860_001	Banana	cytosol	42.39	57.87
HORVU1Hr1G008420.1	Barley	extracellular	15.64	56.3
AT1G13230.1	Thale cress	extracellular	40.53	46.46
PGSC0003DMT400002145	Potato	extracellular	43.83	45.61
CDY19386	Canola	cytosol	38.27	45.59
KRH70637	Soybean	extracellular, golgi	43.42	45.28
Bra004336.1-P	Field mustard	extracellular, golgi	40.12	45.24
KRH75532	Soybean	extracellular, plasma membrane	43.21	45.16
AT1G68780.1	Thale cress	extracellular, golgi	40.12	45.14
Solyc05g009990.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	43.0	44.56
VIT_01s0011g02800.t01	Wine grape	extracellular	44.24	44.51
PGSC0003DMT400010384	Potato	cytosol	41.56	44.4
CDX95990	Canola	extracellular, vacuole	39.3	44.32
Solyc06g069290.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	42.39	44.3
CDX97999	Canola	extracellular	38.27	44.29
CDY33598	Canola	extracellular, golgi	39.09	44.08
KRG92006	Soybean	extracellular, plasma membrane	43.21	44.03
KRH56709	Soybean	extracellular, plasma membrane	42.8	43.61
KRH03836	Soybean	extracellular, plasma membrane, vacuole	42.39	43.46
KRH34777	Soybean	extracellular, vacuole	42.18	42.8
AT3G25670.1	Thale cress	extracellular	41.15	42.11
CDX83542	Canola	extracellular, plasma membrane, vacuole	39.71	40.8
CDY13577	Canola	vacuole	39.71	40.72
Bra025154.1-P	Field mustard	extracellular, plasma membrane, vacuole	39.3	40.3
CDY20429	Canola	cytosol	10.91	36.81
HORVU2Hr1G086860.1	Barley	plasma membrane	28.6	28.19
HORVU3Hr1G069160.1	Barley	extracellular, plasma membrane	14.4	15.28
HORVU5Hr1G092930.2	Barley	plasma membrane	15.23	14.74
HORVU1Hr1G081210.1	Barley	cytosol, peroxisome, plasma membrane	15.02	13.06
Bra019819.1-P	Field mustard	nucleus	38.27	12.38

Protein Annotations

EMBL:AK360923	EnsemblPlants:HORVU3Hr1G013160.4	EnsemblPlantsGene:HORVU3Hr1G013160	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44325
PANTHER:PTHR44325:SF1	PFAM:PF00560	PFAM:PF13855	PFscan:PS51257	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF52058	TMHMM:TMhelix	UniParc:UPI00020062DA	UniProt:F2DAK9	MapMan:35.1	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DAK9]

Coordinates

chrchr3H:-:28352139..28355489

Molecular Weight (calculated)

50906.7 Da

IEP (calculated)

5.272

GRAVY (calculated)

0.113

Length

486 amino acids

Sequence
(BLAST)

001: MKRARGGRLL LALAVLFLAL HLLFSGCAAE GEDEEGSPSP AAAAEPEAPM EDKQKAALYA AIGSFVGKAW NGSSLFPDPC GQTPIQGVSC DLFNGVWYPT
101: VVSIGPVLDN SLQCAPDARF SPQLFDLRRL KSLTFYACFP AANPTAIPAT SWDRLAGTLE TLEFRSNPGL AGAIPASIGR LASLQSLVLV DNNLTGAVPP
201: ELGGLAKLRR LVLSGNGLSG PVPATLGNNN PQLRGLDELL IMDMSKNSLT GSLPPSLGGL KGLLKMDLSN NRLEGRIPPE LAGLDSLTLL DLRNNSLTGG
301: LPEFVQGMPA LQDLLLSTNP LLGGTLMQRG WEKMASLATL DLSNVGLAGT IPESMAAMPR LRFLALDHNR LSGAVPAKLA ALPSIGAMYL NGNNLTGALE
401: FSARFYQRMG SRFASWDNPG LCTAETAGGA PTGVAVCKDA QDPPSVGARD GMDGGGRKPE AASSSSAGMV TVLWWSVLVQ WMMMLL

Best Arabidopsis Sequence Match ( AT3G25670.1 )
(BLAST)

001: MSWIHLVLFL CLTLLCCVTG ELSPEGTDDG APMEKTEQEA LYSAIQGFVG DSWNGSDLYP DPCGWTPIQG VSCDLYGDLW YVTDLTLGLV HENSLSCATS
101: LEIKPQLFKL KHLKSLTFFN CFTSPIRIPK EDWINLASNL ESLEFRSNPG LIGELPETIG SLTKLKSLVV LENGFNGKLP TRICNLTRLK RLVLAGNLFT
201: GTIPDCFNGF KDLLILDMSR NSFSGILPLS VGEMVSLLKL DLSNNQLEGR LPQEIGFLKN LTLLDLRNNR ISGGLFENIE KIPSLTDLVL SGNPMGSDDM
301: MGIKWENMGN LVILDLSKMG LRGEVPLGLT SLRRLRFLGL NDNNLTGTVP SKELETLPCL GALYINGNNL SGELRFSRKF YEKMGTRFKA SKNPNLCQDV
401: VSESRQYVVG LKSCMMEKAE DSLVIKQTWS NLKKEDESSS SMGVMVTRHV LLSNGFMWDL LLELSLILLL NLLVC

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4JA38]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.