Factsheet for HORVU2Hr1G086860.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G357100.1	Wheat	plasma membrane	84.18	85.57
TraesCS2D01G355900.1	Wheat	plasma membrane	84.18	84.69
TraesCS2B01G376300.1	Wheat	extracellular	83.77	84.46
Os01t0623000-00	Rice	plasma membrane	75.46	75.3
EES01095	Sorghum	extracellular, plasma membrane, vacuole	68.97	67.46
Zm00001d044182_P001	Maize	vacuole	68.56	66.8
GSMUA_Achr7P24750_001	Banana	cytosol	51.32	52.71
Bra003550.1-P	Field mustard	extracellular	11.56	45.97
PGSC0003DMT400073695	Potato	cytosol	42.6	45.75
VIT_09s0002g07030.t01	Wine grape	plasma membrane	44.42	45.53
Solyc12g042760.1.1	Tomato	plasma membrane	43.2	44.47
Bra003549.1-P	Field mustard	extracellular	44.83	44.47
CDY54307	Canola	extracellular	44.02	44.11
CDY57686	Canola	extracellular	44.22	43.86
KRH23585	Soybean	extracellular, plasma membrane, vacuole	41.78	42.04
AT1G80080.1	Thale cress	plasma membrane	41.99	41.73
HORVU3Hr1G013160.4	Barley	vacuole	28.19	28.6
HORVU1Hr1G008420.1	Barley	extracellular	6.49	23.7
HORVU3Hr1G069160.1	Barley	extracellular, plasma membrane	17.24	18.56
HORVU5Hr1G092930.2	Barley	plasma membrane	16.84	16.53
HORVU1Hr1G081210.1	Barley	cytosol, peroxisome, plasma membrane	17.85	15.74

Protein Annotations

MapMan:11.10.2.3.3	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005102	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008356	GO:GO:0009605
GO:GO:0009607	GO:GO:0009653	GO:GO:0009719	GO:GO:0009737	GO:GO:0009791	GO:GO:0009987
GO:GO:0010090	GO:GO:0010375	GO:GO:0010376	GO:GO:0016020	GO:GO:0016043	GO:GO:0030154
GO:GO:0033612	GO:GO:0042277	GO:GO:0050832	GO:GO:0071215	GO:GO:1905034	EnsemblPlantsGene:HORVU2Hr1G086860
EnsemblPlants:HORVU2Hr1G086860.1	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
UniProt:M0V2S5	PFAM:PF13855	PRINTS:PR00019	PANTHER:PTHR45297	SMART:SM00369	SUPFAM:SSF52058
SignalP:SignalP-noTM	UniParc:UPI0002959C12	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:625192109..625193896

Molecular Weight (calculated)

51902.0 Da

IEP (calculated)

8.575

GRAVY (calculated)

0.228

Length

493 amino acids

Sequence
(BLAST)

001: MASALLSALT LVVAMVVAGV VRPCRGEFTV VVPDAGALVD APQTGFSDRA RTDPAEQRAV LDIMAATGNG WASGIADVCR GRWHGIECVP DRGDVYHVVS
101: LSFGALSDDT AFPACDATRA TLSPAVLALP HLRSLFFYRC FTANPQPVPP FLGRLGPAFR SLVLRQNGHV GPIPAEIGSL SGLRVLDLHG NHLSSAIPAT
201: VQSLVRLQLL DLSYNRLAGQ VPDLRFQRLS ILDLSHNALQ GRVPASLGQC RSLLKVDLSQ NRLAGTIPDA LGDLPDLILL DLSHNALSGP IPAAIGRLST
301: LRSLILGDNR MQSSTVPCDF FTGLGALTTL VLSGMGLEGS LPESIGGLTQ LRVLRLESNA FTGVIPASFR RLEKASELRV DGNRLVGPIP FGKQMMWRLG
401: KKLRVGGNEG LCYDAKQEGL EGVVALAGVA DCGSVRSRTT TQHLSWKSSG GTTATATATA NVTSSAADSK SISGRGGGHF FLVVLVCLQL ALL

Best Arabidopsis Sequence Match ( AT1G80080.1 )
(BLAST)

001: MARYEFFRQI FIVLSIVSPL VRSFTVITSD STAPSALIDG PQTGFTMTND GARTEPDEQD AVYDIMRATG NDWAAAIPDV CRGRWHGIEC MPDQDNVYHV
101: VSLSFGALSD DTAFPTCDPQ RSYVSESLTR LKHLKALFFY RCLGRAPQRI PAFLGRLGSS LQTLVLRENG FLGPIPDELG NLTNLKVLDL HKNHLNGSIP
201: LSFNRFSGLR SLDLSGNRLT GSIPGFVLPA LSVLDLNQNL LTGPVPPTLT SCGSLIKIDL SRNRVTGPIP ESINRLNQLV LLDLSYNRLS GPFPSSLQGL
301: NSLQALMLKG NTKFSTTIPE NAFKGLKNLM ILVLSNTNIQ GSIPKSLTRL NSLRVLHLEG NNLTGEIPLE FRDVKHLSEL RLNDNSLTGP VPFERDTVWR
401: MRRKLRLYNN AGLCVNRDSD LDDAFGSKSG STVRLCDAET SRPAPSGTVQ HLSREEDGAL PDGATDVSST SKSLGFSYLS AFFLVFPNFI FMLISS

Arabidopsis Description

TMMTMM [Source:UniProtKB/TrEMBL;Acc:A0A178WJY8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.