Factsheet for HORVU1Hr1G081210.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G350800.1	Wheat	extracellular, plasma membrane	68.52	87.64
TraesCS1B01G365000.1	Wheat	extracellular, vacuole	68.16	87.19
TraesCS1D01G353700.1	Wheat	extracellular, vacuole	67.08	85.81
Os05t0530701-01	Rice	plasma membrane	58.5	69.43
EES19861	Sorghum	plastid	57.96	68.35
Zm00001d038742_P001	Maize	mitochondrion	57.07	68.16
Zm00001d010813_P001	Maize	mitochondrion	56.53	67.96
Zm00001d002194_P001	Maize	cytosol	19.14	64.85
HORVU3Hr1G069160.1	Barley	extracellular, plasma membrane	51.52	62.88
HORVU5Hr1G092930.2	Barley	plasma membrane	33.27	37.05
GSMUA_Achr4P15510_001	Banana	cytosol	22.18	29.31
VIT_12s0142g00620.t01	Wine grape	cytosol	21.47	28.1
Solyc10g007830.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	20.75	26.24
Bra004719.1-P	Field mustard	extracellular, plasma membrane, vacuole	21.11	25.99
PGSC0003DMT400054822	Potato	plasma membrane	21.11	25.93
AT2G42800.1	Thale cress	vacuole	21.29	25.76
CDX79853	Canola	extracellular, plasma membrane, vacuole	18.78	24.53
CDY50822	Canola	extracellular, plasma membrane, vacuole	18.6	24.3
HORVU2Hr1G086860.1	Barley	plasma membrane	15.74	17.85
HORVU1Hr1G008420.1	Barley	extracellular	4.11	17.04
HORVU3Hr1G013160.4	Barley	vacuole	13.06	15.02

Protein Annotations

EnsemblPlants:HORVU1Hr1G081210.1	EnsemblPlantsGene:HORVU1Hr1G081210	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PANTHER:PTHR45183
PANTHER:PTHR45183:SF2	PFAM:PF13855	PRINTS:PR00019	SEG:seg	SMART:SM00369	SUPFAM:SSF52058
UniParc:UPI000B46113B	UniProt:A0A287GGU6	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:527302268..527304979

Molecular Weight (calculated)

59700.2 Da

IEP (calculated)

9.928

GRAVY (calculated)

-0.097

Length

559 amino acids

Sequence
(BLAST)

001: MEVSVNIFYG PFLSADRSID HIRSQWNRAK GWWWQQWISP AKARTHARCA SPGCFCRLHG QGQPGPSPVT SGQSVRCPHR SHSHSGITMD GRDDVKKRTP
101: PCPGRRRSQP ASTRTRSAMP AYVVPLLLLL CSLVSLAGAA MDPAEREALL RVMELVSSDR DWRSSSVPDP CAAPWPGLEC KPDADDKRLM RVTRLDFGVP
201: PNPACREAAA FPTHAFSALP HLQSLFLVDC FKNPAKTAAL ALPPAANLSA SRLQQLSIRS NPSLSGTLPP QLASLRSLQV LTVSQNALVH GEVPRGIGGL
301: AGLVHLDLSY NSLTGPIPAR IGELRSLQGL DLSYNSFSGP IPSKLGQLAQ LQKLDLSSNN LTGGVPATFS GLKSLTFLAL SNNGLSGRLP AGLAGLRDLQ
401: YLIMENNPMG VPLPPELGGI ARLQELRLAN SGYSGSIPDT FGRLTSLTTL SLQNNNLTGR IPAGLSRLKR MYHLNLSKNG LDGAVPFDGA FLRRLGRNLD
501: LSGNPGLCVD DRAVVKEVGV DVCGGGDSSV GRAITRGGAM WPALLRPSAS ALLCCCLLL

Best Arabidopsis Sequence Match ( AT2G42800.1 )
(BLAST)

001: MTMKRALPSP SSLLFFFLLI TPLFLCQENR VSASMPPSES ETLFKIMESM SSDQQWRQSH PNPCAPGSSW PGIECKTGPD HLSHVSRLDF GSAPNPSCKS
101: SASFPSSIFT LPFLQSVFFF NCFTHFPTTI MFPIKLIPNS SLQQLSLRSN PSLSGQIPPR ISSLKSLQIL TLSQNRLTGD IPPAIFSLKS LVHLDLSYNK
201: LTGKIPLQLG NLNNLVGLDL SYNSLTGTIP PTISQLGMLQ KLDLSSNSLF GRIPEGVEKL RSLSFMALSN NKLKGAFPKG ISNLQSLQYF IMDNNPMFVA
301: LPVELGFLPK LQELQLENSG YSGVIPESYT KLTNLSSLSL ANNRLTGEIP SGFESLPHVF HLNLSRNLLI GVVPFDSSFL RRLGKNLDLS GNRGLCLNPE
401: DEFSVVKTGV DVCGKNVSSG GGLSVHSSKK KSQASRYYRS CFFANALFPF ALFLGLHQRW VL

Arabidopsis Description

AtRLP29RLP29 [Source:UniProtKB/TrEMBL;Acc:A0A178VT48]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.