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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plasma membrane 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G384300.1 Wheat plasma membrane 81.08 89.25
TraesCS5A01G374600.2 Wheat extracellular, vacuole 81.08 88.29
TraesCS5B01G376600.1 Wheat plasma membrane 78.69 86.24
EER93755 Sorghum extracellular, plasma membrane 64.74 67.99
Zm00001d033230_P001 Maize extracellular, vacuole 63.55 67.16
VIT_09s0070g00390.t01 Wine grape extracellular 41.63 45.63
GSMUA_Achr7P01190_001 Banana extracellular 40.44 45.11
KRH42561 Soybean cytosol 37.25 42.4
KRH11174 Soybean plasma membrane 38.25 40.51
KRH58668 Soybean cytosol 23.71 39.02
KRH21079 Soybean extracellular 38.65 38.19
HORVU3Hr1G069160.1 Barley extracellular, plasma membrane 33.47 36.68
HORVU1Hr1G081210.1 Barley cytosol, peroxisome, plasma membrane 37.05 33.27
HORVU1Hr1G008420.1 Barley extracellular 6.57 24.44
HORVU2Hr1G086860.1 Barley plasma membrane 16.53 16.84
HORVU3Hr1G013160.4 Barley vacuole 14.74 15.23
Protein Annotations
Gene3D:3.80.10.10MapMan:35.1UniProt:A0A287S9L7GO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:HORVU5Hr1G092930EnsemblPlants:HORVU5Hr1G092930.2InterPro:IPR001611
InterPro:IPR032675InterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypPFAM:PF13855PRINTS:PR00019
PANTHER:PTHR45183PANTHER:PTHR45183:SF1SMART:SM00369SUPFAM:SSF52058TMHMM:TMhelixUniParc:UPI000B462717
SEG:seg:::::
Description
No Description!
Coordinates
chrchr5H:-:589795065..589796872
Molecular Weight (calculated)
52571.3 Da
IEP (calculated)
7.701
GRAVY (calculated)
0.263
Length
502 amino acids
Sequence
(BLAST)
001: VRVRVSCQSQ RLKAHKALLE HPDAETYSIL SVYLLCAIPH CVLGKMASSS SLLSAGVSIL LIHAVAVGVA TAGDATAQLP RSELAAIFRV MADLLGDPTW
101: PQLHPRPCTD TPWPGLQCEL APDDSSRLRA TRLHFGPDVS TPPCRPGARL AAPAILGLPH LRTLSLFGCF VDARPVELPP ALFTNASSLE QLVLKSNPGL
201: TGRIPATLTN LKRLQVLSLS QNGFHGEIPR ELGGLAALQQ LDLSYNNITG EIPEEIGGMA SLSILDLSWN DIGGGVPAAL GGLKMLQKAD LSYNRLAGVV
301: PPEVGTLKEL VFLDLSHNGL AGPLPASLAG LAKLQYLLLQ DNPIGTAVPA VVGSLRRLQV LGLSGCNLTG PIPRGAFAAL GSLMALSLDR NRLDGPIPAS
401: LGALPHLGQL NLSQNRLAGE IALPVEFVAR LGRRLDVRGN EELCVGQGRY GGLQASYLRA PPCVGQGRSA NGTSALDDGA AGVYGPVVGL VCHLLVLLVL
501: EL
Best Arabidopsis Sequence Match ( AT2G42800.1 )
(BLAST)
001: MTMKRALPSP SSLLFFFLLI TPLFLCQENR VSASMPPSES ETLFKIMESM SSDQQWRQSH PNPCAPGSSW PGIECKTGPD HLSHVSRLDF GSAPNPSCKS
101: SASFPSSIFT LPFLQSVFFF NCFTHFPTTI MFPIKLIPNS SLQQLSLRSN PSLSGQIPPR ISSLKSLQIL TLSQNRLTGD IPPAIFSLKS LVHLDLSYNK
201: LTGKIPLQLG NLNNLVGLDL SYNSLTGTIP PTISQLGMLQ KLDLSSNSLF GRIPEGVEKL RSLSFMALSN NKLKGAFPKG ISNLQSLQYF IMDNNPMFVA
301: LPVELGFLPK LQELQLENSG YSGVIPESYT KLTNLSSLSL ANNRLTGEIP SGFESLPHVF HLNLSRNLLI GVVPFDSSFL RRLGKNLDLS GNRGLCLNPE
401: DEFSVVKTGV DVCGKNVSSG GGLSVHSSKK KSQASRYYRS CFFANALFPF ALFLGLHQRW VL
Arabidopsis Description
AtRLP29RLP29 [Source:UniProtKB/TrEMBL;Acc:A0A178VT48]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.