Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5D01G384300.1 | Wheat | plasma membrane | 81.08 | 89.25 |
TraesCS5A01G374600.2 | Wheat | extracellular, vacuole | 81.08 | 88.29 |
TraesCS5B01G376600.1 | Wheat | plasma membrane | 78.69 | 86.24 |
EER93755 | Sorghum | extracellular, plasma membrane | 64.74 | 67.99 |
Zm00001d033230_P001 | Maize | extracellular, vacuole | 63.55 | 67.16 |
VIT_09s0070g00390.t01 | Wine grape | extracellular | 41.63 | 45.63 |
GSMUA_Achr7P01190_001 | Banana | extracellular | 40.44 | 45.11 |
KRH42561 | Soybean | cytosol | 37.25 | 42.4 |
KRH11174 | Soybean | plasma membrane | 38.25 | 40.51 |
KRH58668 | Soybean | cytosol | 23.71 | 39.02 |
KRH21079 | Soybean | extracellular | 38.65 | 38.19 |
HORVU3Hr1G069160.1 | Barley | extracellular, plasma membrane | 33.47 | 36.68 |
HORVU1Hr1G081210.1 | Barley | cytosol, peroxisome, plasma membrane | 37.05 | 33.27 |
HORVU1Hr1G008420.1 | Barley | extracellular | 6.57 | 24.44 |
HORVU2Hr1G086860.1 | Barley | plasma membrane | 16.53 | 16.84 |
HORVU3Hr1G013160.4 | Barley | vacuole | 14.74 | 15.23 |
Protein Annotations
Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A287S9L7 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:HORVU5Hr1G092930 | EnsemblPlants:HORVU5Hr1G092930.2 | InterPro:IPR001611 |
InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF13855 | PRINTS:PR00019 |
PANTHER:PTHR45183 | PANTHER:PTHR45183:SF1 | SMART:SM00369 | SUPFAM:SSF52058 | TMHMM:TMhelix | UniParc:UPI000B462717 |
SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:589795065..589796872
Molecular Weight (calculated)
52571.3 Da
IEP (calculated)
7.701
GRAVY (calculated)
0.263
Length
502 amino acids
Sequence
(BLAST)
(BLAST)
001: VRVRVSCQSQ RLKAHKALLE HPDAETYSIL SVYLLCAIPH CVLGKMASSS SLLSAGVSIL LIHAVAVGVA TAGDATAQLP RSELAAIFRV MADLLGDPTW
101: PQLHPRPCTD TPWPGLQCEL APDDSSRLRA TRLHFGPDVS TPPCRPGARL AAPAILGLPH LRTLSLFGCF VDARPVELPP ALFTNASSLE QLVLKSNPGL
201: TGRIPATLTN LKRLQVLSLS QNGFHGEIPR ELGGLAALQQ LDLSYNNITG EIPEEIGGMA SLSILDLSWN DIGGGVPAAL GGLKMLQKAD LSYNRLAGVV
301: PPEVGTLKEL VFLDLSHNGL AGPLPASLAG LAKLQYLLLQ DNPIGTAVPA VVGSLRRLQV LGLSGCNLTG PIPRGAFAAL GSLMALSLDR NRLDGPIPAS
401: LGALPHLGQL NLSQNRLAGE IALPVEFVAR LGRRLDVRGN EELCVGQGRY GGLQASYLRA PPCVGQGRSA NGTSALDDGA AGVYGPVVGL VCHLLVLLVL
501: EL
101: PQLHPRPCTD TPWPGLQCEL APDDSSRLRA TRLHFGPDVS TPPCRPGARL AAPAILGLPH LRTLSLFGCF VDARPVELPP ALFTNASSLE QLVLKSNPGL
201: TGRIPATLTN LKRLQVLSLS QNGFHGEIPR ELGGLAALQQ LDLSYNNITG EIPEEIGGMA SLSILDLSWN DIGGGVPAAL GGLKMLQKAD LSYNRLAGVV
301: PPEVGTLKEL VFLDLSHNGL AGPLPASLAG LAKLQYLLLQ DNPIGTAVPA VVGSLRRLQV LGLSGCNLTG PIPRGAFAAL GSLMALSLDR NRLDGPIPAS
401: LGALPHLGQL NLSQNRLAGE IALPVEFVAR LGRRLDVRGN EELCVGQGRY GGLQASYLRA PPCVGQGRSA NGTSALDDGA AGVYGPVVGL VCHLLVLLVL
501: EL
001: MTMKRALPSP SSLLFFFLLI TPLFLCQENR VSASMPPSES ETLFKIMESM SSDQQWRQSH PNPCAPGSSW PGIECKTGPD HLSHVSRLDF GSAPNPSCKS
101: SASFPSSIFT LPFLQSVFFF NCFTHFPTTI MFPIKLIPNS SLQQLSLRSN PSLSGQIPPR ISSLKSLQIL TLSQNRLTGD IPPAIFSLKS LVHLDLSYNK
201: LTGKIPLQLG NLNNLVGLDL SYNSLTGTIP PTISQLGMLQ KLDLSSNSLF GRIPEGVEKL RSLSFMALSN NKLKGAFPKG ISNLQSLQYF IMDNNPMFVA
301: LPVELGFLPK LQELQLENSG YSGVIPESYT KLTNLSSLSL ANNRLTGEIP SGFESLPHVF HLNLSRNLLI GVVPFDSSFL RRLGKNLDLS GNRGLCLNPE
401: DEFSVVKTGV DVCGKNVSSG GGLSVHSSKK KSQASRYYRS CFFANALFPF ALFLGLHQRW VL
101: SASFPSSIFT LPFLQSVFFF NCFTHFPTTI MFPIKLIPNS SLQQLSLRSN PSLSGQIPPR ISSLKSLQIL TLSQNRLTGD IPPAIFSLKS LVHLDLSYNK
201: LTGKIPLQLG NLNNLVGLDL SYNSLTGTIP PTISQLGMLQ KLDLSSNSLF GRIPEGVEKL RSLSFMALSN NKLKGAFPKG ISNLQSLQYF IMDNNPMFVA
301: LPVELGFLPK LQELQLENSG YSGVIPESYT KLTNLSSLSL ANNRLTGEIP SGFESLPHVF HLNLSRNLLI GVVPFDSSFL RRLGKNLDLS GNRGLCLNPE
401: DEFSVVKTGV DVCGKNVSSG GGLSVHSSKK KSQASRYYRS CFFANALFPF ALFLGLHQRW VL
Arabidopsis Description
AtRLP29RLP29 [Source:UniProtKB/TrEMBL;Acc:A0A178VT48]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.