CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
extracellular 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42561	Soybean	cytosol	73.77	51.02
KRH11174	Soybean	plasma membrane	62.3	40.08
KRH21079	Soybean	extracellular	59.67	35.83
VIT_09s0070g00390.t01	Wine grape	extracellular	45.25	30.13
TraesCS5D01G384300.1	Wheat	plasma membrane	39.02	26.1
EER93755	Sorghum	extracellular, plasma membrane	40.66	25.94
TraesCS5A01G374600.2	Wheat	extracellular, vacuole	38.69	25.6
TraesCS5B01G376600.1	Wheat	plasma membrane	38.36	25.55
GSMUA_Achr7P01190_001	Banana	extracellular	37.38	25.33
Zm00001d033230_P001	Maize	extracellular, vacuole	38.36	24.63
HORVU5Hr1G092930.2	Barley	plasma membrane	39.02	23.71
KRG92006	Soybean	extracellular, plasma membrane	18.69	11.95
KRH34777	Soybean	extracellular, vacuole	18.36	11.69
KRH75532	Soybean	extracellular, plasma membrane	17.7	11.61
KRH70637	Soybean	extracellular, golgi	17.7	11.59
KRH03836	Soybean	extracellular, plasma membrane, vacuole	16.07	10.34
KRH32220	Soybean	extracellular, plasma membrane, vacuole	15.08	10.31
KRH23585	Soybean	extracellular, plasma membrane, vacuole	16.07	10.0
KRH56709	Soybean	extracellular, plasma membrane	15.41	9.85
KRH19593	Soybean	extracellular, plasma membrane	13.44	9.58

Protein Annotations

EMBL:ACUP02003280	EnsemblPlants:KRH58668	EnsemblPlantsGene:GLYMA_05G141700	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf
PANTHER:PTHR44325	PANTHER:PTHR44325:SF2	PRINTS:PR00019	ProteinID:KRH58668	ProteinID:KRH58668.1	SEG:seg
SUPFAM:SSF52058	UniParc:UPI0002948781	UniProt:K7KQ69	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr5:-:33492470..33495095

Molecular Weight (calculated)

33271.3 Da

IEP (calculated)

6.237

GRAVY (calculated)

-0.152

Length

305 amino acids

Sequence
(BLAST)

001: MGALLEDPYR AQTHPQPCTD TPWPGVECEL SNSNQPIFHV TKIHIGADIV FPFQPCKPSA YLSQSLMKLK YIKTLSIFDC FGASPVILPK TLFGPFTSLE
101: HLALENNPSL CGDIPTSLGG VTGLRNSLQG NIPSQIGGLV SLEQLDLSYN NLSGQIPMEI GGVLLYSLEQ LQLLQKLDLH SNMLSGNIPP DIGKLKPPSL
201: GNNSLSGQVP PNLGSLPSLD QQNISHNKLS GVLELPGDFI QKLGKMLDLR GNSELCISDQ SKKKNLSSYL EIPSCLNTRQ RNDNNYFAVL IEKQLLASVL
301: LEKKE

Best Arabidopsis Sequence Match ( AT2G42800.1 )
(BLAST)

001: MTMKRALPSP SSLLFFFLLI TPLFLCQENR VSASMPPSES ETLFKIMESM SSDQQWRQSH PNPCAPGSSW PGIECKTGPD HLSHVSRLDF GSAPNPSCKS
101: SASFPSSIFT LPFLQSVFFF NCFTHFPTTI MFPIKLIPNS SLQQLSLRSN PSLSGQIPPR ISSLKSLQIL TLSQNRLTGD IPPAIFSLKS LVHLDLSYNK
201: LTGKIPLQLG NLNNLVGLDL SYNSLTGTIP PTISQLGMLQ KLDLSSNSLF GRIPEGVEKL RSLSFMALSN NKLKGAFPKG ISNLQSLQYF IMDNNPMFVA
301: LPVELGFLPK LQELQLENSG YSGVIPESYT KLTNLSSLSL ANNRLTGEIP SGFESLPHVF HLNLSRNLLI GVVPFDSSFL RRLGKNLDLS GNRGLCLNPE
401: DEFSVVKTGV DVCGKNVSSG GGLSVHSSKK KSQASRYYRS CFFANALFPF ALFLGLHQRW VL

Arabidopsis Description

AtRLP29RLP29 [Source:UniProtKB/TrEMBL;Acc:A0A178VT48]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.