Factsheet for TraesCS5A01G374600.2

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 1
extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G384300.1	Wheat	plasma membrane	94.14	95.18
TraesCS5B01G376600.1	Wheat	plasma membrane	93.71	94.32
HORVU5Hr1G092930.2	Barley	plasma membrane	88.29	81.08
Zm00001d033230_P001	Maize	extracellular, vacuole	69.63	67.58
EER93755	Sorghum	extracellular, plasma membrane	69.85	67.36
VIT_09s0070g00390.t01	Wine grape	extracellular	44.69	44.98
GSMUA_Achr7P01190_001	Banana	extracellular	43.82	44.89
KRH42561	Soybean	cytosol	40.56	42.4
KRH11174	Soybean	plasma membrane	43.17	41.98
TraesCS1A01G350800.1	Wheat	extracellular, plasma membrane	39.48	41.65
KRH21079	Soybean	extracellular	43.6	39.57
KRH58668	Soybean	cytosol	25.6	38.69
TraesCS3A01G282900.1	Wheat	extracellular, plasma membrane	37.53	38.36
TraesCS2A01G357100.1	Wheat	plasma membrane	19.31	18.35
TraesCS3A01G072700.2	Wheat	extracellular	16.92	15.92
TraesCS3A01G072600.2	Wheat	extracellular	16.49	15.48

Protein Annotations

EnsemblPlants:TraesCS5A01G374600.2	EnsemblPlantsGene:TraesCS5A01G374600	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PANTHER:PTHR45183
PANTHER:PTHR45183:SF1	PFAM:PF00560	PFAM:PF13855	PRINTS:PR00019	SEG:seg	SignalP:SignalP-noTM
SMART:SM00369	SUPFAM:SSF52058	TMHMM:TMhelix	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5A:-:572863978..572865443

Molecular Weight (calculated)

47821.4 Da

IEP (calculated)

6.617

GRAVY (calculated)

0.278

Length

461 amino acids

Sequence
(BLAST)

001: MASSSPSSLL SAGVSILLIQ AVAVSVGVAT AGDAPAQLPR SELAAIFRVM ADLLGDPTWP QLHPRPCTDT PWPGLQCELA PDDSTRLRST RLHFGPDVST
101: PPCRPGARLA APAILGLPHL RTLSLFGCFV DAGPVELPPA LFTNASSLEQ LVLKSNPGLT GRIPATLTNL KSLQVLSLSQ NGFHGEIPRE LGGLAALQQL
201: DLSYNNITGE QIPEEIGGMA SLSILDLSWN SIGGGVPAAL GGLKMLQKAD LSYNRLAGVV PPEIGSLKEL VFLDLSHNGL AGPLPASLAG LAKLQYLLLQ
301: DNPIGTAVPA VVGSLRRLQV LGLSGCNLTG PIPRGAFAAL GSLMALSLDR NRLDGPIPAS LGALPHLGQL NLSQNRLAGE IALPVEFVAR LGRRLDVRGN
401: EELCVGQGRY SGLQASYLRA PPCVGRGSTN GTAALDEGTA GVYGPVVGLV CHLLVLLVLE L

Best Arabidopsis Sequence Match ( AT4G28560.1 )
(BLAST)

001: MASFTNLSLL LLFLFTATLI TSQQSDDDEN ASPQLALDPS EQEAVYRVLD SVNSAISWRT IFPDDICASP PDGVVCDNLY ASQNGVATSV HVTEFHLGYL
101: SDYTQNPPCS SNATLDPLLF TAFKHLRKLF FYKCFTDARA SLPLTVPEDF GSVLEELVFI ENPSLVGEIG AMIGNFTKLR RLVLTGNGFH GSIPGQIGDL
201: VSLEEITLSR NSLTGGFPAN ATSRLKNLKV LDFSHNFING NAPDSIGDLT ELLKLDLSFN EFTGEVPSGV GNLKKLVFLD LSYNRFGNFG VPLFLAEMSS
301: LREVHLSGNK LGGRIPAIWK NLEGISGIGF SRMGLEGNIP ASMGSSLKNL CFLALDNNNL DGQIPEEFGF LDSAREINLE NNNLTGKAPF SDSFRDRIGK
401: KLKLSGNVNL QVKNSDPHLA GRALYSSARK VLPLIYFPAT LLALYISITQ

Arabidopsis Description

RIC7ROP-interactive CRIB motif-containing protein 7 [Source:UniProtKB/TrEMBL;Acc:F4JLB7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.