Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G353700.1 | Wheat | extracellular, vacuole | 94.74 | 94.74 |
| TraesCS1B01G365000.1 | Wheat | extracellular, vacuole | 91.99 | 91.99 |
| HORVU1Hr1G081210.1 | Barley | cytosol, peroxisome, plasma membrane | 87.64 | 68.52 |
| Os05t0530701-01 | Rice | plasma membrane | 73.68 | 68.37 |
| Zm00001d010813_P001 | Maize | mitochondrion | 71.85 | 67.53 |
| EES19861 | Sorghum | plastid | 71.62 | 66.03 |
| Zm00001d038742_P001 | Maize | mitochondrion | 70.48 | 65.81 |
| Zm00001d002194_P001 | Maize | cytosol | 24.49 | 64.85 |
| TraesCS3A01G282900.1 | Wheat | extracellular, plasma membrane | 63.62 | 61.64 |
| TraesCS5A01G374600.2 | Wheat | extracellular, vacuole | 41.65 | 39.48 |
| GSMUA_Achr4P15510_001 | Banana | cytosol | 28.6 | 29.55 |
| VIT_12s0142g00620.t01 | Wine grape | cytosol | 27.23 | 27.87 |
| Bra004719.1-P | Field mustard | extracellular, plasma membrane, vacuole | 27.69 | 26.65 |
| PGSC0003DMT400054822 | Potato | plasma membrane | 27.23 | 26.15 |
| Solyc10g007830.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 26.09 | 25.79 |
| AT2G42800.1 | Thale cress | vacuole | 27.23 | 25.76 |
| CDX79853 | Canola | extracellular, plasma membrane, vacuole | 24.03 | 24.53 |
| CDY50822 | Canola | extracellular, plasma membrane, vacuole | 23.34 | 23.83 |
| TraesCS2A01G357100.1 | Wheat | plasma membrane | 20.82 | 18.76 |
| TraesCS3A01G072700.2 | Wheat | extracellular | 17.39 | 15.51 |
| TraesCS3A01G072600.2 | Wheat | extracellular | 16.02 | 14.26 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G350800.1 | EnsemblPlantsGene:TraesCS1A01G350800 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PANTHER:PTHR45183 |
| PANTHER:PTHR45183:SF2 | PFAM:PF00560 | PFAM:PF13855 | PRINTS:PR00019 | SEG:seg | SignalP:SignalP-noTM |
| SMART:SM00369 | SUPFAM:SSF52058 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr1A:-:535435142..535436455
Molecular Weight (calculated)
45680.4 Da
IEP (calculated)
8.865
GRAVY (calculated)
0.079
Length
437 amino acids
Sequence
(BLAST)
(BLAST)
001: MPATAVALLL CSLLAVAGAA MDPAEREALL RVMEAVSSDR DWRSSSGTDP CAAPWPGLEC KPDAADKRLM RVTRLDFGVP PNPACREAAA FPTHAFSALP
101: HLQSLFLVDC FKNPAKTAAL ALPPAANLSA SRLQQLSIRS NPSLSGTLPP QLASLRSLQV LTVSQNPLVR GEVPRGIGEL AGLVHLDLSY NSLTGPIPAR
201: IGELRSLQGL DLSYNSFSGP IPSKLGRLAQ LQKLDLSSNN LTGSVPATFS GLSSLTFLAL SNNGLSGRLP AGLAGLRDLQ YLIMENNPMG VPLQPELGGI
301: ARLQELRLAN SGYSGSIPET FGRLTSLTTL SLQNNNLTGR IPAGLSRLKR MYHLNLSKNG LDGAVPFDGA FLRRLGRNLD LSGNPGLCVD DRAATKEIGV
401: GVCGGGDGSG ASPGRAIARG GALWPSASAL LCCCLLL
101: HLQSLFLVDC FKNPAKTAAL ALPPAANLSA SRLQQLSIRS NPSLSGTLPP QLASLRSLQV LTVSQNPLVR GEVPRGIGEL AGLVHLDLSY NSLTGPIPAR
201: IGELRSLQGL DLSYNSFSGP IPSKLGRLAQ LQKLDLSSNN LTGSVPATFS GLSSLTFLAL SNNGLSGRLP AGLAGLRDLQ YLIMENNPMG VPLQPELGGI
301: ARLQELRLAN SGYSGSIPET FGRLTSLTTL SLQNNNLTGR IPAGLSRLKR MYHLNLSKNG LDGAVPFDGA FLRRLGRNLD LSGNPGLCVD DRAATKEIGV
401: GVCGGGDGSG ASPGRAIARG GALWPSASAL LCCCLLL
001: MLWQTFFSSL LLLSLLFGCN GDESLPEVTD SEEAPMDKRE REALYSAIQG FVGDSWNGSA LYPDPCGWTP IQGVSCDIYN DLWYVTDLSL GLIYENSLPC
101: SSSLQIRPEL FELKHLRSLS FFNCFISPMV IAKEELWTNF ASNLESLEFR SNPGLIGELP ETIGNLTKLK SLVVLENGFS GELPASICNL KRLKRLVFAG
201: NSFAGMIPNC FKGLKELLIL DLSRNSFSGT LPTSFGDLVS LLKLDLSNNL LEGNLPQELG FLKNLTLLDL RNNRFSGGLS KNIENIQSLT ELVLSNNPMG
301: EEDMVGTNWG KMSNLVVLDL SKMGLRGEIP TSLTNLKRLR FLGLNNNNLT GFVPSKKLEA LPCLGALYIN GNNLTGELRF STKFYEKMGR RFKASKNPNL
401: CQPLEMVMSE SHKHLSPLGV KPCT
101: SSSLQIRPEL FELKHLRSLS FFNCFISPMV IAKEELWTNF ASNLESLEFR SNPGLIGELP ETIGNLTKLK SLVVLENGFS GELPASICNL KRLKRLVFAG
201: NSFAGMIPNC FKGLKELLIL DLSRNSFSGT LPTSFGDLVS LLKLDLSNNL LEGNLPQELG FLKNLTLLDL RNNRFSGGLS KNIENIQSLT ELVLSNNPMG
301: EEDMVGTNWG KMSNLVVLDL SKMGLRGEIP TSLTNLKRLR FLGLNNNNLT GFVPSKKLEA LPCLGALYIN GNNLTGELRF STKFYEKMGR RFKASKNPNL
401: CQPLEMVMSE SHKHLSPLGV KPCT
Arabidopsis Description
PII-2Piriformospora indica-insensitive protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5PP26]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.