Factsheet for TraesCS3A01G072600.2

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G086700.2	Wheat	extracellular, plasma membrane, vacuole	93.08	93.27
TraesCS3A01G072700.2	Wheat	extracellular	89.0	89.18
TraesCS3D01G072300.2	Wheat	endoplasmic reticulum, plasma membrane, vacuole	86.97	88.59
HORVU3Hr1G013160.4	Barley	vacuole	83.3	84.16
Os01t0110800-01	Rice	plasma membrane	58.86	64.22
KXG32097	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	60.9	62.55
KXG32099	Sorghum	plasma membrane	60.9	62.03
Zm00001d040130_P001	Maize	mitochondrion	64.56	59.7
GSMUA_Achr8P03860_001	Banana	cytosol	42.36	58.43
HORVU1Hr1G008420.1	Barley	extracellular	14.46	52.59
AT1G68780.1	Thale cress	extracellular, golgi	39.51	44.91
CDY19386	Canola	cytosol	37.27	44.85
KRH75532	Soybean	extracellular, plasma membrane	42.36	44.73
KRH70637	Soybean	extracellular, golgi	42.36	44.64
AT1G13230.1	Thale cress	extracellular	38.49	44.58
Solyc05g009990.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	42.36	44.35
Bra004336.1-P	Field mustard	extracellular, golgi	38.9	44.32
PGSC0003DMT400002145	Potato	extracellular	41.75	43.9
Solyc06g069290.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	41.55	43.87
CDX95990	Canola	extracellular, vacuole	38.49	43.85
CDX97999	Canola	extracellular	37.47	43.81
VIT_01s0011g02800.t01	Wine grape	extracellular	42.97	43.69
PGSC0003DMT400010384	Potato	cytosol	40.33	43.52
KRG92006	Soybean	extracellular, plasma membrane	41.96	43.19
CDY33598	Canola	extracellular, golgi	37.88	43.16
KRH56709	Soybean	extracellular, plasma membrane	41.14	42.35
KRH03836	Soybean	extracellular, plasma membrane, vacuole	40.73	42.19
KRH34777	Soybean	extracellular, vacuole	40.73	41.75
AT3G25670.1	Thale cress	extracellular	40.12	41.47
CDX83542	Canola	extracellular, plasma membrane, vacuole	39.31	40.8
CDY13577	Canola	vacuole	39.31	40.72
Bra025154.1-P	Field mustard	extracellular, plasma membrane, vacuole	38.9	40.3
CDY20429	Canola	cytosol	11.0	37.5
TraesCS2A01G357100.1	Wheat	plasma membrane	29.33	29.69
TraesCS5A01G374600.2	Wheat	extracellular, vacuole	15.48	16.49
TraesCS1A01G350800.1	Wheat	extracellular, plasma membrane	14.26	16.02
TraesCS3A01G282900.1	Wheat	extracellular, plasma membrane	14.46	15.74
Bra019819.1-P	Field mustard	nucleus	36.66	11.98

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF13855
PFscan:PS51257	PANTHER:PTHR44325	PANTHER:PTHR44325:SF1	SMART:SM00369	SUPFAM:SSF52058	SignalP:SignalP-noTM
EnsemblPlantsGene:TraesCS3A01G072600	EnsemblPlants:TraesCS3A01G072600.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3A:+:44727565..44730162

Molecular Weight (calculated)

51205.0 Da

IEP (calculated)

5.539

GRAVY (calculated)

0.124

Length

491 amino acids

Sequence
(BLAST)

001: MGRARGGRLL PVLAALFVAL LLISGCAAEG EDEEGSPVVA AEEPEAPMED KQKAALYAAI GSFVGKAWNG SGLFPDPCGQ TPIQGVSCDL FNGVWYPTVV
101: SIGPVLDNSL QCAPDARFSP QLFDLRRLKS LTFYACFPAA NPTTIPAASW DKLSGTLETL EFRSNPGLSG AIPASLGRLA SLRSLVLVDN NLTGAVPSEL
201: GGLAKLRRLV LSGNGLSGPV PATLGNNNPQ LRRLDNEQLL IVDMSKNSLT GSLPPSLGGL KGLLKMDLSN NRLDGRIPPE LAGLESLTLL DLRNNSLTGG
301: LPDFVLAMPA LQDLLLSSNP LLGGTLMQRG WEKMASLATL DLSNVGLAGA IPESMAAMPR LRFLALDHNR LSGTVPAKLA ALPSIGAMYL NGNNLTGALE
401: FSARFYQRMG SRFASWDNPG LCTAETAGGA PTGVAVCKDA QEPPRVGVRD GMDAGGGKPE ASSSFPASSS SFGLSGHKVA GLWCLVMVMV L

Best Arabidopsis Sequence Match ( AT3G25670.1 )
(BLAST)

001: MSWIHLVLFL CLTLLCCVTG ELSPEGTDDG APMEKTEQEA LYSAIQGFVG DSWNGSDLYP DPCGWTPIQG VSCDLYGDLW YVTDLTLGLV HENSLSCATS
101: LEIKPQLFKL KHLKSLTFFN CFTSPIRIPK EDWINLASNL ESLEFRSNPG LIGELPETIG SLTKLKSLVV LENGFNGKLP TRICNLTRLK RLVLAGNLFT
201: GTIPDCFNGF KDLLILDMSR NSFSGILPLS VGEMVSLLKL DLSNNQLEGR LPQEIGFLKN LTLLDLRNNR ISGGLFENIE KIPSLTDLVL SGNPMGSDDM
301: MGIKWENMGN LVILDLSKMG LRGEVPLGLT SLRRLRFLGL NDNNLTGTVP SKELETLPCL GALYINGNNL SGELRFSRKF YEKMGTRFKA SKNPNLCQDV
401: VSESRQYVVG LKSCMMEKAE DSLVIKQTWS NLKKEDESSS SMGVMVTRHV LLSNGFMWDL LLELSLILLL NLLVC

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4JA38]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.