Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G282900.1 | Wheat | extracellular, plasma membrane | 93.79 | 94.21 |
| HORVU3Hr1G069160.1 | Barley | extracellular, plasma membrane | 94.01 | 92.58 |
| TraesCS3B01G316600.1 | Wheat | extracellular, plasma membrane | 91.8 | 90.39 |
| Os01t0729400-01 | Rice | plasma membrane, vacuole | 76.72 | 76.21 |
| Zm00001d011757_P001 | Maize | extracellular, plasma membrane | 70.07 | 70.54 |
| EES01405 | Sorghum | extracellular, plasma membrane | 72.95 | 69.41 |
| TraesCS1A01G350800.1 | Wheat | extracellular, plasma membrane | 61.64 | 63.62 |
| TraesCS5A01G374600.2 | Wheat | extracellular, vacuole | 38.36 | 37.53 |
| GSMUA_Achr4P15510_001 | Banana | cytosol | 29.05 | 30.97 |
| VIT_12s0142g00620.t01 | Wine grape | cytosol | 28.82 | 30.45 |
| Bra004719.1-P | Field mustard | extracellular, plasma membrane, vacuole | 27.94 | 27.75 |
| CDY50822 | Canola | extracellular, plasma membrane, vacuole | 25.72 | 27.1 |
| Solyc10g007830.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 26.39 | 26.92 |
| AT2G42800.1 | Thale cress | vacuole | 27.27 | 26.62 |
| CDX79853 | Canola | extracellular, plasma membrane, vacuole | 25.06 | 26.4 |
| PGSC0003DMT400054822 | Potato | plasma membrane | 26.61 | 26.37 |
| TraesCS2A01G357100.1 | Wheat | plasma membrane | 18.63 | 17.32 |
| TraesCS3A01G072700.2 | Wheat | extracellular | 16.19 | 14.9 |
| TraesCS3A01G072600.2 | Wheat | extracellular | 15.74 | 14.46 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G282900.1 | EnsemblPlantsGene:TraesCS3A01G282900 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PANTHER:PTHR45183 |
| PANTHER:PTHR45183:SF3 | PFAM:PF13855 | PRINTS:PR00019 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00369 |
| SUPFAM:SSF52058 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:511597445..511598800
Molecular Weight (calculated)
47242.0 Da
IEP (calculated)
6.975
GRAVY (calculated)
0.174
Length
451 amino acids
Sequence
(BLAST)
(BLAST)
001: MPASIAVFLC LLSAAAAMDA AERETLFLVM DAVSSDRDWR SESPDPCGAP WPGLECKPAP GTAAPLHVTR LDFGVEPNPS CKDAAAFPPQ VLTLPRLQSL
101: FFVNCFNNPA AVTALVLPSA NLSSSTLQQL SIRANPSLSG VMPPQLVRLR SLQVLTISQN GLVRGEIPRG IGELRSLVHL DLSYNSLSGP VPTRISELKG
201: LVGLDLSYNA LSGPIPGRIG DLRQLQKLDL SSNNLTGGIP DTVANLTSLT FLALSNNGLN GYFPPGLSAL RNLQYLIMDN NPMGVPLPSE LGSLARLQEL
301: RLAGSGYSGP IPAAFGQLAS LTTLSLEDNN LTGEIPAGLS RLHRIYHLNL SNNGLGGAVP FDGAFLRRLG RNLDLSGNSG LCLDVVRDVG VGVAACHGGG
401: GGDGSLARDS VSSAARGVMA RGSTDSFRFR LLGPVCVVVI SCIFFPPNGY A
101: FFVNCFNNPA AVTALVLPSA NLSSSTLQQL SIRANPSLSG VMPPQLVRLR SLQVLTISQN GLVRGEIPRG IGELRSLVHL DLSYNSLSGP VPTRISELKG
201: LVGLDLSYNA LSGPIPGRIG DLRQLQKLDL SSNNLTGGIP DTVANLTSLT FLALSNNGLN GYFPPGLSAL RNLQYLIMDN NPMGVPLPSE LGSLARLQEL
301: RLAGSGYSGP IPAAFGQLAS LTTLSLEDNN LTGEIPAGLS RLHRIYHLNL SNNGLGGAVP FDGAFLRRLG RNLDLSGNSG LCLDVVRDVG VGVAACHGGG
401: GGDGSLARDS VSSAARGVMA RGSTDSFRFR LLGPVCVVVI SCIFFPPNGY A
001: MTMKRALPSP SSLLFFFLLI TPLFLCQENR VSASMPPSES ETLFKIMESM SSDQQWRQSH PNPCAPGSSW PGIECKTGPD HLSHVSRLDF GSAPNPSCKS
101: SASFPSSIFT LPFLQSVFFF NCFTHFPTTI MFPIKLIPNS SLQQLSLRSN PSLSGQIPPR ISSLKSLQIL TLSQNRLTGD IPPAIFSLKS LVHLDLSYNK
201: LTGKIPLQLG NLNNLVGLDL SYNSLTGTIP PTISQLGMLQ KLDLSSNSLF GRIPEGVEKL RSLSFMALSN NKLKGAFPKG ISNLQSLQYF IMDNNPMFVA
301: LPVELGFLPK LQELQLENSG YSGVIPESYT KLTNLSSLSL ANNRLTGEIP SGFESLPHVF HLNLSRNLLI GVVPFDSSFL RRLGKNLDLS GNRGLCLNPE
401: DEFSVVKTGV DVCGKNVSSG GGLSVHSSKK KSQASRYYRS CFFANALFPF ALFLGLHQRW VL
101: SASFPSSIFT LPFLQSVFFF NCFTHFPTTI MFPIKLIPNS SLQQLSLRSN PSLSGQIPPR ISSLKSLQIL TLSQNRLTGD IPPAIFSLKS LVHLDLSYNK
201: LTGKIPLQLG NLNNLVGLDL SYNSLTGTIP PTISQLGMLQ KLDLSSNSLF GRIPEGVEKL RSLSFMALSN NKLKGAFPKG ISNLQSLQYF IMDNNPMFVA
301: LPVELGFLPK LQELQLENSG YSGVIPESYT KLTNLSSLSL ANNRLTGEIP SGFESLPHVF HLNLSRNLLI GVVPFDSSFL RRLGKNLDLS GNRGLCLNPE
401: DEFSVVKTGV DVCGKNVSSG GGLSVHSSKK KSQASRYYRS CFFANALFPF ALFLGLHQRW VL
Arabidopsis Description
AtRLP29RLP29 [Source:UniProtKB/TrEMBL;Acc:A0A178VT48]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.