Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d011757_P001 | Maize | extracellular, plasma membrane | 78.9 | 83.48 |
| TraesCS3D01G282900.1 | Wheat | extracellular, plasma membrane | 71.31 | 75.28 |
| TraesCS3B01G316600.1 | Wheat | extracellular, plasma membrane | 72.15 | 74.67 |
| Os01t0729400-01 | Rice | plasma membrane, vacuole | 71.52 | 74.67 |
| TraesCS3A01G282900.1 | Wheat | extracellular, plasma membrane | 69.41 | 72.95 |
| HORVU3Hr1G069160.1 | Barley | extracellular, plasma membrane | 70.46 | 72.93 |
| EES19861 | Sorghum | plastid | 60.34 | 60.34 |
| EER93755 | Sorghum | extracellular, plasma membrane | 37.55 | 37.24 |
| GSMUA_Achr4P15510_001 | Banana | cytosol | 28.06 | 31.44 |
| VIT_12s0142g00620.t01 | Wine grape | cytosol | 26.37 | 29.27 |
| Solyc10g007830.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 27.0 | 28.96 |
| Bra004719.1-P | Field mustard | extracellular, plasma membrane, vacuole | 26.16 | 27.31 |
| PGSC0003DMT400054822 | Potato | plasma membrane | 26.16 | 27.25 |
| AT2G42800.1 | Thale cress | vacuole | 26.37 | 27.06 |
| CDX79853 | Canola | extracellular, plasma membrane, vacuole | 23.63 | 26.17 |
| CDY50822 | Canola | extracellular, plasma membrane, vacuole | 23.42 | 25.93 |
| EES01095 | Sorghum | extracellular, plasma membrane, vacuole | 18.99 | 17.86 |
| KXG32097 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 17.72 | 17.57 |
| KXG32099 | Sorghum | plasma membrane | 17.72 | 17.43 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:8062117 | UniProt:C5XJ04 | EnsemblPlants:EES01405 | ProteinID:EES01405 |
| ProteinID:EES01405.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001611 | InterPro:IPR032675 |
| InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF13855 | PRINTS:PR00019 | PANTHER:PTHR45183 |
| PANTHER:PTHR45183:SF3 | SMART:SM00369 | EnsemblPlantsGene:SORBI_3003G283900 | SUPFAM:SSF52058 | SignalP:SignalP-noTM | UniParc:UPI0001A848A2 |
| RefSeq:XP_002456285.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:61796748..61798172
Molecular Weight (calculated)
48808.6 Da
IEP (calculated)
5.168
GRAVY (calculated)
0.163
Length
474 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLPASIALL LSLLPVAADA AAAAAAAAAA AAMDPTERET LFRVMEAVSS DRDWRVESPD PCGAPWPGLE CKPAADAAAR MHVTRLDFGV EPNPTCKDTA
101: SFPPEVFSLP HLQSLFFVDC FTNPAAATTL TLPAPGANLS AASGLQQLSI RANPALSGTM PPALASLRAL QVLTISQNGL VRGEIPQGIG DLTSLVRLDL
201: SYNSLSGPVP SQIGQLKSLV GLDLSYNSLS GAIPSRIGEL RQLQKLDLSS NNLTGGIPDA VANLTSLTFL ALSNNGLTGH FPPGISGLRN LQYLIMDNNP
301: MGVPLPSELG SLARLQELRL AGSGYSGPIP EAFGQLASLT TLSLQDNNLT GPIPAALSRL GRMYHLNLSN NALGGAVPFD GAFLRRLGGN LDLSGNSGLC
401: LDDRSVLRDG GVGVGACRGG GDGDTPSSSP RTSSGSRAPG RGVLTTTGSL LCLPSPACVA VCCLFALMNE HALY
101: SFPPEVFSLP HLQSLFFVDC FTNPAAATTL TLPAPGANLS AASGLQQLSI RANPALSGTM PPALASLRAL QVLTISQNGL VRGEIPQGIG DLTSLVRLDL
201: SYNSLSGPVP SQIGQLKSLV GLDLSYNSLS GAIPSRIGEL RQLQKLDLSS NNLTGGIPDA VANLTSLTFL ALSNNGLTGH FPPGISGLRN LQYLIMDNNP
301: MGVPLPSELG SLARLQELRL AGSGYSGPIP EAFGQLASLT TLSLQDNNLT GPIPAALSRL GRMYHLNLSN NALGGAVPFD GAFLRRLGGN LDLSGNSGLC
401: LDDRSVLRDG GVGVGACRGG GDGDTPSSSP RTSSGSRAPG RGVLTTTGSL LCLPSPACVA VCCLFALMNE HALY
001: MTMKRALPSP SSLLFFFLLI TPLFLCQENR VSASMPPSES ETLFKIMESM SSDQQWRQSH PNPCAPGSSW PGIECKTGPD HLSHVSRLDF GSAPNPSCKS
101: SASFPSSIFT LPFLQSVFFF NCFTHFPTTI MFPIKLIPNS SLQQLSLRSN PSLSGQIPPR ISSLKSLQIL TLSQNRLTGD IPPAIFSLKS LVHLDLSYNK
201: LTGKIPLQLG NLNNLVGLDL SYNSLTGTIP PTISQLGMLQ KLDLSSNSLF GRIPEGVEKL RSLSFMALSN NKLKGAFPKG ISNLQSLQYF IMDNNPMFVA
301: LPVELGFLPK LQELQLENSG YSGVIPESYT KLTNLSSLSL ANNRLTGEIP SGFESLPHVF HLNLSRNLLI GVVPFDSSFL RRLGKNLDLS GNRGLCLNPE
401: DEFSVVKTGV DVCGKNVSSG GGLSVHSSKK KSQASRYYRS CFFANALFPF ALFLGLHQRW VL
101: SASFPSSIFT LPFLQSVFFF NCFTHFPTTI MFPIKLIPNS SLQQLSLRSN PSLSGQIPPR ISSLKSLQIL TLSQNRLTGD IPPAIFSLKS LVHLDLSYNK
201: LTGKIPLQLG NLNNLVGLDL SYNSLTGTIP PTISQLGMLQ KLDLSSNSLF GRIPEGVEKL RSLSFMALSN NKLKGAFPKG ISNLQSLQYF IMDNNPMFVA
301: LPVELGFLPK LQELQLENSG YSGVIPESYT KLTNLSSLSL ANNRLTGEIP SGFESLPHVF HLNLSRNLLI GVVPFDSSFL RRLGKNLDLS GNRGLCLNPE
401: DEFSVVKTGV DVCGKNVSSG GGLSVHSSKK KSQASRYYRS CFFANALFPF ALFLGLHQRW VL
Arabidopsis Description
AtRLP29RLP29 [Source:UniProtKB/TrEMBL;Acc:A0A178VT48]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.