CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038742_P001	Maize	mitochondrion	82.49	83.55
Zm00001d010813_P001	Maize	mitochondrion	76.37	77.85
Zm00001d002194_P001	Maize	cytosol	26.37	75.76
TraesCS1B01G365000.1	Wheat	extracellular, vacuole	68.14	73.91
TraesCS1A01G350800.1	Wheat	extracellular, plasma membrane	66.03	71.62
TraesCS1D01G353700.1	Wheat	extracellular, vacuole	65.82	71.4
Os05t0530701-01	Rice	plasma membrane	69.2	69.64
EES01405	Sorghum	extracellular, plasma membrane	60.34	60.34
HORVU1Hr1G081210.1	Barley	cytosol, peroxisome, plasma membrane	68.35	57.96
EER93755	Sorghum	extracellular, plasma membrane	36.71	36.4
GSMUA_Achr4P15510_001	Banana	cytosol	26.37	29.55
VIT_12s0142g00620.t01	Wine grape	cytosol	24.89	27.63
Solyc10g007830.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	25.53	27.38
Bra004719.1-P	Field mustard	extracellular, plasma membrane, vacuole	26.16	27.31
PGSC0003DMT400054822	Potato	plasma membrane	25.95	27.03
AT2G42800.1	Thale cress	vacuole	26.16	26.84
CDY50822	Canola	extracellular, plasma membrane, vacuole	23.0	25.47
CDX79853	Canola	extracellular, plasma membrane, vacuole	23.0	25.47
KXG32099	Sorghum	plasma membrane	17.09	16.8
KXG32097	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	16.88	16.74
EES01095	Sorghum	extracellular, plasma membrane, vacuole	17.09	16.07

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:8068972	UniProt:C5Z1H6	EnsemblPlants:EES19861	ProteinID:EES19861
ProteinID:EES19861.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF13855	PRINTS:PR00019
PANTHER:PTHR45183	PANTHER:PTHR45183:SF2	SMART:SM00369	EnsemblPlantsGene:SORBI_3009G208300	SUPFAM:SSF52058	SignalP:SignalP-noTM
UniParc:UPI0001A89164	RefSeq:XP_002441431.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:55562410..55563920

Molecular Weight (calculated)

49056.3 Da

IEP (calculated)

7.925

GRAVY (calculated)

0.192

Length

474 amino acids

Sequence
(BLAST)

001: MAPAPSSSPS SSRTLPLPPA VLYLLLLSLQ VAAAGAAMDP AERETLLRVM ESVSADRDWR EAAGDDPCAS PWPGLECRPG TAPAPGANGS AARMHVARLD
101: FGVPPNPTCK DTATFPVAAF ALPELRALFL VGCFKNPDAV AAFALPPASN LSSSRLQQLS VRANPSLSGT LPPQLASLRS LQVLTVSQNA LVRGAVPRGI
201: GELADLVHLD LSYNSLTGPI PTALGDLRGL VGLDLSYNSF SGTIPSRLGD LAQLQKLDLS SNNLTGGVPA ALTRLKALTF MALSNNGLRG GLPAGLSGLR
301: DLQYLIMENN PMGVPLPSEL GSIARLQELR LANSGYSGSI PDTFGLLSSL TTLSLENNNL TGRIPAGLSR LKRMYHLNLS KNGLDGVVPF DGAFLRQLGR
401: NLDLSGNPGL CVADRAVVPD VGVGVCGGDV ACDTSAAESS VVGRVVRGVV TRGRWPAGLL TPAAAVALCS CLLL

Best Arabidopsis Sequence Match ( AT2G42800.1 )
(BLAST)

001: MTMKRALPSP SSLLFFFLLI TPLFLCQENR VSASMPPSES ETLFKIMESM SSDQQWRQSH PNPCAPGSSW PGIECKTGPD HLSHVSRLDF GSAPNPSCKS
101: SASFPSSIFT LPFLQSVFFF NCFTHFPTTI MFPIKLIPNS SLQQLSLRSN PSLSGQIPPR ISSLKSLQIL TLSQNRLTGD IPPAIFSLKS LVHLDLSYNK
201: LTGKIPLQLG NLNNLVGLDL SYNSLTGTIP PTISQLGMLQ KLDLSSNSLF GRIPEGVEKL RSLSFMALSN NKLKGAFPKG ISNLQSLQYF IMDNNPMFVA
301: LPVELGFLPK LQELQLENSG YSGVIPESYT KLTNLSSLSL ANNRLTGEIP SGFESLPHVF HLNLSRNLLI GVVPFDSSFL RRLGKNLDLS GNRGLCLNPE
401: DEFSVVKTGV DVCGKNVSSG GGLSVHSSKK KSQASRYYRS CFFANALFPF ALFLGLHQRW VL

Arabidopsis Description

AtRLP29RLP29 [Source:UniProtKB/TrEMBL;Acc:A0A178VT48]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.