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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 6
  • vacuole 4
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
mitochondrion: 27297264
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d002194_P001 Maize cytosol 33.76 95.15
Zm00001d038742_P001 Maize mitochondrion 78.06 77.56
EES19861 Sorghum plastid 77.85 76.37
TraesCS1B01G365000.1 Wheat extracellular, vacuole 68.17 72.54
TraesCS1A01G350800.1 Wheat extracellular, plasma membrane 67.53 71.85
TraesCS1D01G353700.1 Wheat extracellular, vacuole 67.53 71.85
Os05t0530701-01 Rice plasma membrane 68.39 67.52
Zm00001d011757_P001 Maize extracellular, plasma membrane 57.63 59.82
HORVU1Hr1G081210.1 Barley cytosol, peroxisome, plasma membrane 67.96 56.53
Zm00001d033230_P001 Maize extracellular, vacuole 36.99 36.21
GSMUA_Achr4P15510_001 Banana cytosol 26.45 29.08
Solyc10g007830.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 27.1 28.51
VIT_12s0142g00620.t01 Wine grape cytosol 25.59 27.87
PGSC0003DMT400054822 Potato plasma membrane 27.1 27.69
Bra004719.1-P Field mustard extracellular, plasma membrane, vacuole 25.81 26.43
AT2G42800.1 Thale cress vacuole 26.24 26.41
CDX79853 Canola extracellular, plasma membrane, vacuole 22.58 24.53
CDY50822 Canola extracellular, plasma membrane, vacuole 22.37 24.3
Zm00001d044182_P001 Maize vacuole 17.85 16.4
Zm00001d040130_P001 Maize mitochondrion 16.99 14.88
Protein Annotations
EntrezGene:103635874Gene3D:3.80.10.10MapMan:35.1ProteinID:AQK95013.1GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:IPR001611InterPro:IPR032675UniProt:K7VHK7InterPro:LRR_dom_sfInterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtypPFAM:PF13855PRINTS:PR00019PANTHER:PTHR45183PANTHER:PTHR45183:SF2SMART:SM00369
SUPFAM:SSF52058SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000220B50BEnsemblPlantsGene:Zm00001d010813EnsemblPlants:Zm00001d010813_P001
EnsemblPlants:Zm00001d010813_T001SEG:seg::::
Description
receptor like protein 29
Coordinates
chr8:-:128624529..128626084
Molecular Weight (calculated)
48947.7 Da
IEP (calculated)
9.827
GRAVY (calculated)
0.155
Length
465 amino acids
Sequence
(BLAST)
001: MAPPAPSSRT TLSRAVLYLL LLLSLQVAAP AAAAMDPAER ETLLRVMESV SADRDWREAA GADPCSAPWP GLECRPGTAA ARMHVARLDF GVPPHPTCRD
101: TATFPLAAFA LPELRSLFLV GCFRNPRAVA AFTLPPASNL SASRLQQLSV RSNPSLAGAL PPQLARLRSL RVLTVSQNAL VRGAVPEGIG DLAGLVHLDL
201: SYNSLTGPIP ARLGGLRGLV GLDLSYNSFS GPIPGRLGDL AQLQKLDLSS NNLTGGVPAA VTRLRALTFL ALANNGLRGR LPAGLSALRD LQYLILENNP
301: MGGVPLPPEL GNIPRLQELR LANSGYSGPI PDTFRLLSSL TTLSLENNNL TGRIPPGLSR LKRMYHLNLS KNGLDGVVPF DAAFLRRLGR NLDLSGNPGL
401: CVTNRAVMPG VGVGVCGDDV VDCERSAAAE SSVVGRVVRG EVTTGRWPAG LLRPAAVALC SCLLL
Best Arabidopsis Sequence Match ( AT2G42800.1 )
(BLAST)
001: MTMKRALPSP SSLLFFFLLI TPLFLCQENR VSASMPPSES ETLFKIMESM SSDQQWRQSH PNPCAPGSSW PGIECKTGPD HLSHVSRLDF GSAPNPSCKS
101: SASFPSSIFT LPFLQSVFFF NCFTHFPTTI MFPIKLIPNS SLQQLSLRSN PSLSGQIPPR ISSLKSLQIL TLSQNRLTGD IPPAIFSLKS LVHLDLSYNK
201: LTGKIPLQLG NLNNLVGLDL SYNSLTGTIP PTISQLGMLQ KLDLSSNSLF GRIPEGVEKL RSLSFMALSN NKLKGAFPKG ISNLQSLQYF IMDNNPMFVA
301: LPVELGFLPK LQELQLENSG YSGVIPESYT KLTNLSSLSL ANNRLTGEIP SGFESLPHVF HLNLSRNLLI GVVPFDSSFL RRLGKNLDLS GNRGLCLNPE
401: DEFSVVKTGV DVCGKNVSSG GGLSVHSSKK KSQASRYYRS CFFANALFPF ALFLGLHQRW VL
Arabidopsis Description
AtRLP29RLP29 [Source:UniProtKB/TrEMBL;Acc:A0A178VT48]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.