Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 5
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G365000.1 | Wheat | extracellular, vacuole | 69.43 | 74.83 |
| TraesCS1A01G350800.1 | Wheat | extracellular, plasma membrane | 68.37 | 73.68 |
| TraesCS1D01G353700.1 | Wheat | extracellular, vacuole | 67.73 | 73.0 |
| Zm00001d038742_P001 | Maize | mitochondrion | 70.06 | 70.51 |
| EES19861 | Sorghum | plastid | 69.64 | 69.2 |
| Zm00001d010813_P001 | Maize | mitochondrion | 67.52 | 68.39 |
| Os01t0729400-01 | Rice | plasma membrane, vacuole | 64.54 | 66.96 |
| Zm00001d002194_P001 | Maize | cytosol | 22.93 | 65.45 |
| HORVU1Hr1G081210.1 | Barley | cytosol, peroxisome, plasma membrane | 69.43 | 58.5 |
| GSMUA_Achr4P15510_001 | Banana | cytosol | 28.03 | 31.21 |
| Bra004719.1-P | Field mustard | extracellular, plasma membrane, vacuole | 27.81 | 28.85 |
| Solyc10g007830.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 26.96 | 28.73 |
| VIT_12s0142g00620.t01 | Wine grape | cytosol | 25.69 | 28.34 |
| PGSC0003DMT400054822 | Potato | plasma membrane | 27.18 | 28.13 |
| AT2G42800.1 | Thale cress | vacuole | 27.39 | 27.92 |
| CDY50822 | Canola | extracellular, plasma membrane, vacuole | 24.2 | 26.64 |
| CDX79853 | Canola | extracellular, plasma membrane, vacuole | 24.2 | 26.64 |
| Os01t0110800-01 | Rice | plasma membrane | 17.83 | 18.67 |
| Os01t0623000-00 | Rice | plasma membrane | 18.26 | 17.41 |
| Os06t0627500-01 | Rice | extracellular | 11.68 | 12.42 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:9271295 | ProteinID:AAT47071.1 | ProteinID:BAH93227.1 | ProteinID:BAS95031.1 |
| ProteinID:EEE64458.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001611 | InterPro:IPR032675 |
| InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | EnsemblPlantsGene:Os05g0530701 | EnsemblPlants:Os05t0530701-01 | PFAM:PF13855 |
| PRINTS:PR00019 | PANTHER:PTHR45183 | PANTHER:PTHR45183:SF2 | UniProt:Q6I5I5 | SMART:SM00369 | SUPFAM:SSF52058 |
| SignalP:SignalP-noTM | UniParc:UPI00003B0D6B | RefSeq:XP_015638465.1 | SEG:seg | : | : |
Description
Leucine-rich repeat, plant specific containing protein. (Os05t0530701-01)
Coordinates
chr5:-:26356728..26358548
Molecular Weight (calculated)
49315.9 Da
IEP (calculated)
7.103
GRAVY (calculated)
0.247
Length
471 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVASVVLLL HLLSMAAAAT AALAMDPAER ETLLLVMEAV SSDREWRSVG PDPCGSPWPG LECKPVPAAG NVSSAAARLH VTRLDFGVAP NPTCKDGAAF
101: PHLAFALPHL QSLFLVDCFK NPAATTAFTL PPSANLTSSR LQQLSVRSNP SLSGTLPPQL SSIRSLQVLT VSQNALIRGE VPQGIGELKS LVHLDLSYNS
201: LTGTIPSRIG ELRSLVGLDL SYNSFSGSIP GQLGDLAMLQ KLDLSSNNLT GGVPATITGL TSLTFLALSN NGLSGHLPAG LSDLLDLQYL IMENNPMGVP
301: LPSELGDIAR LQELRLANSG YSGSIPETLG RLASLTTLSL ENNNLTGRIP AGLSRLKRMY HLNLSKNGLD GVVPFDGAFL RRLGRNLDLS GNPGLCVDGR
401: AVLQADVGVG VCRRAGDGGD IASVSAATDV LSVGTLFRRD GQLWLAGGRW SALLLIRPVA VALCCSCCLL L
101: PHLAFALPHL QSLFLVDCFK NPAATTAFTL PPSANLTSSR LQQLSVRSNP SLSGTLPPQL SSIRSLQVLT VSQNALIRGE VPQGIGELKS LVHLDLSYNS
201: LTGTIPSRIG ELRSLVGLDL SYNSFSGSIP GQLGDLAMLQ KLDLSSNNLT GGVPATITGL TSLTFLALSN NGLSGHLPAG LSDLLDLQYL IMENNPMGVP
301: LPSELGDIAR LQELRLANSG YSGSIPETLG RLASLTTLSL ENNNLTGRIP AGLSRLKRMY HLNLSKNGLD GVVPFDGAFL RRLGRNLDLS GNPGLCVDGR
401: AVLQADVGVG VCRRAGDGGD IASVSAATDV LSVGTLFRRD GQLWLAGGRW SALLLIRPVA VALCCSCCLL L
001: MTMKRALPSP SSLLFFFLLI TPLFLCQENR VSASMPPSES ETLFKIMESM SSDQQWRQSH PNPCAPGSSW PGIECKTGPD HLSHVSRLDF GSAPNPSCKS
101: SASFPSSIFT LPFLQSVFFF NCFTHFPTTI MFPIKLIPNS SLQQLSLRSN PSLSGQIPPR ISSLKSLQIL TLSQNRLTGD IPPAIFSLKS LVHLDLSYNK
201: LTGKIPLQLG NLNNLVGLDL SYNSLTGTIP PTISQLGMLQ KLDLSSNSLF GRIPEGVEKL RSLSFMALSN NKLKGAFPKG ISNLQSLQYF IMDNNPMFVA
301: LPVELGFLPK LQELQLENSG YSGVIPESYT KLTNLSSLSL ANNRLTGEIP SGFESLPHVF HLNLSRNLLI GVVPFDSSFL RRLGKNLDLS GNRGLCLNPE
401: DEFSVVKTGV DVCGKNVSSG GGLSVHSSKK KSQASRYYRS CFFANALFPF ALFLGLHQRW VL
101: SASFPSSIFT LPFLQSVFFF NCFTHFPTTI MFPIKLIPNS SLQQLSLRSN PSLSGQIPPR ISSLKSLQIL TLSQNRLTGD IPPAIFSLKS LVHLDLSYNK
201: LTGKIPLQLG NLNNLVGLDL SYNSLTGTIP PTISQLGMLQ KLDLSSNSLF GRIPEGVEKL RSLSFMALSN NKLKGAFPKG ISNLQSLQYF IMDNNPMFVA
301: LPVELGFLPK LQELQLENSG YSGVIPESYT KLTNLSSLSL ANNRLTGEIP SGFESLPHVF HLNLSRNLLI GVVPFDSSFL RRLGKNLDLS GNRGLCLNPE
401: DEFSVVKTGV DVCGKNVSSG GGLSVHSSKK KSQASRYYRS CFFANALFPF ALFLGLHQRW VL
Arabidopsis Description
AtRLP29RLP29 [Source:UniProtKB/TrEMBL;Acc:A0A178VT48]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.